Protein

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Genbank accession
ABV91226.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MTYDDTFDIFFGTDKPVNIGAMFDGVTVIGRDIGNTWNNTLVGGIGRYGSSFSFVNNESKKITVQFTKTLRQNEMALFREELAGKLDFPQGSQRLLFNDQPNRYYNANVEGNIGFQYDVKSGVGVGTITFLVPDGLAHSTFRKNITKNTIDPNIGGITFGNDGIITVDVNNEGNVEAYPTITIDNKVENDYINISTAVSTFQLGHKDDPSGMSLGKVSAKSIINIKQNDNSSTTGWGLFTPAGNMVSQSSADFYSNGGSLKYGSNHSLFGSGLIINSEGSNPVQPGARWKGGFSKYTLPTAIQDFTLDFTAKYWESQMGQTGIIEIILVDENNVMISSYIMQKGDTSGDTSSAILRYNSNYPNDNRTDYQEFKFGANNNERGQSLPNVAFNSAKGQARISKKDQTLSWMYNGATYSVSSTLLATAKVKSIYIGIGGWMWKGRTGTIQVLTVNSLSLVQNNAIGLISAPNLYTIGSRNIINMYTGKFSYILDPKASTIGNNDIEQLVDGSEPFSIPKGKSQILIQGSQWADWVTNPPDISVSFEENFM
Physico‐chemical
properties
protein length:547 AA
molecular weight: 59794,96070 Da
isoelectric point:5,23927
aromaticity:0,10603
hydropathy:-0,33108

Domains

Domains [InterPro]
DC_0420
STR
2–547
DC_0420
G3DSA:2.40.30.200
ATT
3–138
G3DSA:2.40.30.200
IPR006520
Unmapped
22–138
IPR006520
IPR008841
STR
46–132
IPR008841
ABV91226.1
1 547
Architecture
ATT
STR
ATT 2-138 | STR 139-547
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 1706
[NCBI] 		475178 Uroviricota > Caudoviricetes > Fremauxvirus >
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABV91226.1 [NCBI]
Genbank nucleotide accession
EU081845 [NCBI]
CDS location
range 18816 -> 20459
strand +
CDS
ATGACATATGATGACACATTTGATATATTTTTTGGTACTGATAAACCTGTAAATATCGGTGCCATGTTTGATGGTGTCACTGTAATTGGTAGAGATATTGGTAACACATGGAACAATACTCTTGTTGGCGGGATTGGACGATATGGTTCGTCCTTTTCATTTGTCAATAATGAAAGTAAAAAAATTACAGTACAATTTACAAAGACACTTAGACAAAACGAAATGGCTTTATTTCGTGAAGAACTTGCGGGTAAGTTAGATTTTCCACAAGGATCACAAAGATTACTTTTCAATGACCAACCTAATAGGTATTATAATGCTAATGTTGAAGGTAACATTGGTTTTCAATACGATGTTAAATCTGGTGTGGGTGTAGGGACTATTACATTCTTAGTTCCTGATGGATTAGCTCATAGTACATTTAGAAAAAACATCACAAAAAATACAATTGATCCAAATATAGGTGGTATAACTTTTGGCAATGATGGTATTATAACTGTAGATGTTAATAATGAAGGAAATGTTGAAGCATATCCAACGATTACAATTGACAATAAAGTAGAAAATGATTATATAAACATATCCACTGCTGTTAGTACTTTTCAGTTAGGACATAAAGATGATCCTTCAGGAATGTCACTAGGTAAGGTATCTGCAAAATCTATAATCAATATTAAACAAAATGATAATTCTTCTACTACTGGATGGGGTTTATTTACACCAGCTGGTAATATGGTATCTCAATCATCTGCTGATTTCTATTCAAATGGTGGTTCATTAAAATATGGATCTAATCATTCTTTATTTGGTTCAGGACTTATCATAAATAGTGAGGGTTCTAATCCAGTACAACCTGGAGCCAGATGGAAAGGTGGATTTAGTAAGTATACATTACCTACAGCTATTCAAGATTTCACTTTGGATTTTACAGCAAAGTATTGGGAATCTCAGATGGGACAAACTGGTATAATAGAAATAATATTGGTTGATGAGAATAATGTAATGATTTCTTCTTATATTATGCAAAAGGGTGATACATCAGGAGATACTTCTTCAGCAATTTTACGATATAATTCTAACTATCCTAATGATAATAGAACCGATTATCAAGAATTTAAATTTGGTGCTAATAATAATGAAAGAGGTCAATCATTACCAAATGTAGCTTTTAATTCAGCTAAAGGACAGGCACGAATTAGTAAAAAAGATCAAACATTATCATGGATGTATAACGGCGCAACGTATTCAGTTTCATCTACGCTTTTAGCGACAGCTAAAGTAAAATCTATATATATTGGTATAGGCGGATGGATGTGGAAAGGTAGAACAGGTACTATACAAGTACTCACTGTAAATTCTTTATCTTTAGTTCAAAATAATGCTATAGGATTAATATCTGCTCCTAATTTATACACTATAGGTTCCAGAAATATTATAAATATGTATACTGGTAAATTTTCTTATATATTAGATCCAAAAGCTAGCACTATAGGTAATAATGATATAGAACAATTAGTTGATGGTAGTGAACCATTTAGTATACCTAAAGGAAAATCACAGATATTAATACAAGGATCTCAATGGGCTGACTGGGTAACTAATCCTCCAGACATATCAGTATCTTTTGAAGAAAACTTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d339f5a898f8d2b9b48cedfe725863cc2db6db10001318b13a61ea14b3222a5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7951
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of 1706, a virulent phage from Lactococcus lactis with similarities to prophages from other Firmicutes Garneau,J.E., Tremblay,D.M. and Moineau,S. 2008 18191977 GenBank