Protein

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Genbank accession

YP_010650720.1 [GenBank]

Protein name

baseplate wedge protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MKQNLNVGNVVDDGTGDYLRKGGLKLNNNFDELYYQLGDGSFPHAAGAWKTYSATQGAVLAANFGKSYALNTTSGRITVNLPKGNIDNYNYVIRLRDVFGTWQRNPVRVVPAAGDTIKGSPNAVEINRNFADLELVYCSPGRWEYIKNKSIDRIDNNDIATVATQEFIATQGQRDFMNIFSAHDYNPTNLKVFHRGNLLFYGKDNVFDPVNAEVGSPVPGNATALQAYDGKNIRLRNACNEGDTVIVVSYMDGLGQWRSSYNRRQVRVLDSKYTNKTTINGSVIVDDLENKKVFTMAELGVTPDQPVNPNAVELSINSVLQYQAGTAGLPVFRCEGADTEDVDDCYALGGQWVESATDFLFDTGSDGIIVEEVRFDKPLEHGDIITLVWYNNNIGTTLELEEILLETDSRYVSGMDTVNITGDVRITDVNSPFWPNVEPVSPTEYQPNTVPAIFDLVYPVGTIYENTVNPNNPSTYMGFGLWKRLEGTVLVGWSSSPGTRFNLNNNHLDSTGKQQSTAGGTGGNDDLTLKAGQIPMLRTDDKVLVVDPNGPIVVGGCQFDPDASGPAYTKYREAQATINKENIIDPASIDIMNPYITVYRWMRVA

Physico‐chemical properties

protein length:	605 AA
molecular weight:	66674,50970 Da
isoelectric point:	4,69242
aromaticity:	0,09587
hydropathy:	-0,36777

Domains

Domains [InterPro]

IPR036240
STR
1–236

IPR036240 IPR054430 IPR053827

IPR034695
Unmapped
1–605

IPR034695

DC_2238
STR
1–585

DC_2238

IPR008987
ATT
2–152

IPR008987 IPR056391

G3DSA:1.20.5.960
Unmapped
13–42

G3DSA:1.20.5.960 IPR027411

YP_010650720.1

1 605

Architecture

ATT

STR

ATT

ATT 1-268 | STR 269-452 | ATT 453-604 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	236	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR034695	Unmapped	-	1	605	InterPro	Baseplate wedge protein gp10	-	-	-	-
DC_2238	STR	DC_2238	1	585	Novel HMM	DC_2238	Central	Low	Positional only	73 proteins / 73 hits
IPR008987	ATT	DC_0752	2	152	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	13	42	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	50	151	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR056391	ATT	DC_0417	158	268	InterPro cluster	Baseplate protein gp9-like, C-terminal	C-terminal	Medium	Text match	98 proteins / 98 hits
IPR054430	TAS	DC_0704	270	392	InterPro cluster	Baseplate wedge protein gp10, domain 3	Central	High	Text match	67 proteins / 67 hits
IPR053827	ATT	DC_0313	453	604	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_010650720.1

1 605

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	331	331	0,9390
Central domain	332	530	200	0,1495
C-terminal	531	605	74	0,9330

Note: Constraints were applied during segmentation.
Fixed 6 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-331

Central
332-530

C-terminal
531-605

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Enterobacter phage vB_EclM_Q7622 [NCBI]	2908628	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

YP_010650720.1 [NCBI]

Genbank nucleotide accession

NC_070778 [NCBI]

CDS location

range 92898 -> 94715
strand +

CDS

ATGAAACAAAATCTTAATGTAGGTAACGTTGTAGATGACGGTACCGGTGATTACCTGAGAAAAGGTGGTCTTAAGCTTAATAACAACTTTGACGAGTTATATTATCAATTAGGCGACGGTTCATTCCCTCACGCCGCAGGCGCATGGAAAACATATTCTGCCACGCAGGGTGCTGTATTAGCAGCTAACTTTGGTAAATCATACGCTTTGAATACTACTAGTGGTCGTATTACCGTAAATCTTCCTAAAGGTAATATTGACAACTATAACTATGTTATTCGTCTAAGAGATGTATTCGGTACCTGGCAACGTAACCCGGTTCGAGTAGTTCCTGCTGCCGGTGACACCATTAAGGGCTCTCCTAACGCAGTAGAAATTAACAGAAACTTTGCTGACCTGGAATTAGTCTATTGCTCACCTGGTCGTTGGGAATATATCAAGAACAAATCAATCGACCGTATTGATAACAATGATATCGCTACAGTAGCAACTCAAGAATTTATTGCTACACAAGGGCAAAGGGATTTCATGAACATCTTTTCTGCTCATGATTATAACCCTACAAACTTGAAAGTTTTCCATCGTGGTAACTTATTGTTCTACGGTAAAGATAATGTTTTTGACCCTGTTAACGCTGAAGTAGGTTCTCCTGTTCCTGGTAATGCAACCGCACTACAGGCGTATGATGGCAAAAATATAAGACTTCGTAACGCATGTAATGAAGGCGATACTGTTATTGTTGTGTCTTATATGGATGGTTTAGGCCAATGGCGATCTTCATATAACCGTAGACAAGTCCGTGTTCTTGATTCTAAGTATACAAACAAAACTACTATAAACGGTAGCGTTATTGTTGACGATTTAGAAAATAAAAAAGTTTTCACTATGGCTGAATTGGGTGTCACTCCAGACCAACCTGTGAACCCTAATGCGGTTGAACTGTCTATAAACTCCGTTCTTCAATACCAAGCAGGTACTGCAGGTTTGCCAGTATTCCGTTGTGAAGGCGCTGATACAGAAGATGTTGACGACTGTTATGCTTTAGGTGGTCAATGGGTCGAATCAGCCACTGATTTTCTTTTTGATACCGGTTCAGATGGTATTATTGTTGAAGAAGTTAGATTCGATAAACCTTTAGAGCATGGCGATATCATTACTTTAGTATGGTATAACAACAATATTGGTACTACTCTAGAGCTTGAAGAAATTTTGTTAGAAACTGATTCCAGATATGTTTCTGGTATGGACACCGTTAATATTACCGGCGATGTTCGTATCACTGACGTTAATAGCCCGTTCTGGCCTAACGTTGAACCTGTTTCTCCTACAGAATATCAGCCAAATACGGTACCTGCTATTTTCGATTTAGTATATCCTGTTGGAACTATTTACGAAAATACGGTGAACCCTAATAACCCTTCTACTTATATGGGGTTTGGTCTTTGGAAAAGATTAGAAGGAACTGTTTTAGTAGGTTGGTCTTCATCTCCTGGTACTAGGTTTAACCTAAATAATAACCATTTAGATTCTACAGGAAAACAGCAAAGCACTGCTGGCGGTACCGGCGGTAATGATGACTTGACTCTTAAGGCAGGTCAAATTCCTATGCTTAGAACTGATGATAAAGTCCTTGTTGTTGACCCTAACGGCCCTATTGTGGTTGGTGGATGTCAATTTGACCCGGATGCATCAGGTCCTGCTTATACAAAATATCGTGAAGCTCAAGCTACAATCAATAAAGAAAATATTATTGACCCTGCTAGTATTGATATCATGAACCCATATATAACCGTTTATCGTTGGATGAGGGTTGCTTAA

Genome Context

Tertiary structure

PDB ID

a2d78762de3d9d606291a22eeaf168734929a2caea048f0a594892141ee764e7

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6192

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence