Protein

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Genbank accession
QBI79016.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARAWINNWKTTLSVGLSPGALSLTVPDAAAALLPLSGGSWVLLTLADDAGAQHEIVKATARAGGVVTIDRAQEGTSDGNWPAGTAIYAAVTAGDLMTLQARIQALESGASGGTLVDETGATLVDDAGNNLIMENI
Physico‐chemical
properties
protein length:136 AA
molecular weight: 13729,25590 Da
isoelectric point:4,21191
aromaticity:0,03676
hydropathy:0,24118

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_BR201a
[NCBI] 		2563510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI79016.1 [NCBI]
Genbank nucleotide accession
MK510993.1 [NCBI]
CDS location
range 33907 -> 34317
strand +
CDS
ATGGCGAGAGCCTGGATCAACAACTGGAAGACGACGCTGAGCGTAGGGCTGTCGCCTGGCGCGTTGAGCCTGACGGTGCCGGATGCCGCCGCCGCGCTGCTGCCTCTCTCCGGCGGTAGCTGGGTGCTGTTGACGCTGGCGGATGACGCTGGCGCGCAGCATGAAATCGTGAAAGCAACCGCGCGTGCCGGCGGGGTGGTGACGATCGATCGCGCCCAGGAAGGAACCTCCGACGGCAACTGGCCGGCGGGAACGGCGATCTATGCAGCCGTCACGGCCGGCGACCTCATGACGCTCCAGGCGCGCATCCAGGCTCTGGAGTCCGGGGCGTCTGGCGGCACCCTTGTCGACGAAACCGGCGCAACGCTGGTCGACGACGCCGGCAACAACCTGATTATGGAGAACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
90ccd886a2c0caa694089a5e756e88e3eefe7a53b8567de292f0e8366c865a12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank