Protein

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Genbank accession
XPA10006.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDIFSQKISELQSSTGPSENAYFPLSEANSDFSEKVSVATLRETIGFENAFPTVAIALLATKESDVFFVYENEKKENVLGYVNQGNGNYSALMTDSNVQLRYATSSFIVNSLFFLRGAESFEELRTIKPWYEGQRIKLKSYYVDGLTGGGEFVARLTVGVDDSGVIAAGSGFYWERVLTDPVIYPEYFGADTSLSDNSTALSTTFNYAIANKKSVCIKANIKVSTVTIAGFNFTIFGPGTMTFSDPNGLVISNGNAGIIDGPALVFSGVGSTGITVTGSNNVVVRNCTISNHGRNGGVYILNSSNVMVSKNTFLNAAGDATFGSSTTADVNIWGTNNGCSVVDNRFISGGGYAIQIRSHALGDVSVNHVISRNFIDGYNSYGINCYRNKQSLTDTQVLKNVIVSENVISNISGNRPSNPATPDVLIFGTGIYMQGSEMSTVVNNTITNVCTNSNNDLLAPAGIGVTNIGNINIANNTIVNSGMYGIKINDSVGLGDVYGRVIVESNIIDTVGTDGIMVQDRNNISVTNNSIKGAARDGIKINTSPSSQTKVVSTDKKISFNSLKTITGIGIYIEYSQSWSIESNCVTDCAQGLVFQYSAHGRVIGNTIVNASTRGYYAHVTNTTPGSIIFTENKCLNTVTQIAVEHPIDYYNNPQLTPTGTYANAREITADLPDVTGCEVLNLKPTAAMNLTGFAGGKIGQRITIWVNNALVTMVQSGSFILAGLKNRNPGYNSAVTFVKTKAGWVEVAQSGYAVAYINPTSGSSVTVSDYTGGIYIQGSSALASLSVTLPASPVDDQVCTICSQSGVTALTLTANTGQSIFPPTTPTALSAGISIQYRYRAAANGWFRYQ
Physico‐chemical
properties
protein length:852 AA
molecular weight: 90617,30570 Da
isoelectric point:5,48572
aromaticity:0,08920
hydropathy:-0,01033

Domains

Domains [InterPro]
DC_1164
ATT
3–120
DC_1164 IPR059934 IPR012334 IPR012334
IPR011050
STR
196–451
IPR011050 IPR011050
IPR039448
ENZ
246–391
IPR039448 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR006626
Unmapped
280–303
IPR006626 IPR006626 IPR006626 IPR006626 IPR039448
DC_1714
RBD
519–760
DC_1714
XPA10006.1
1 852
Architecture
ATT
RBD
STR
RBD
ATT 3-120 | RBD 121-179 | STR 190-663 | RBD 664-760 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPA10006.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,9896
Central domain 198 662 466 0,9938
C-terminal 663 852 189 0,9855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-662
C-terminal
663-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage LPKP23
[NCBI] 		3400895 No lineage information
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPA10006.1 [NCBI]
Genbank nucleotide accession
PV112478.1 [NCBI]
CDS location
range 136352 -> 138910
strand +
CDS
ATGTCCGATATTTTTTCTCAAAAGATCTCTGAGTTACAGTCCAGTACAGGGCCGAGCGAAAACGCTTATTTCCCTCTCTCTGAAGCCAATAGCGACTTCTCAGAAAAAGTGAGTGTCGCCACCTTAAGGGAAACTATTGGTTTTGAGAATGCTTTCCCTACCGTCGCTATTGCGTTACTGGCGACTAAAGAAAGTGACGTCTTCTTCGTCTATGAAAACGAAAAGAAAGAAAACGTTTTGGGTTATGTCAATCAGGGTAATGGAAATTATTCCGCTTTGATGACCGATAGTAACGTGCAACTGCGCTACGCTACGAGTAGTTTCATTGTTAATAGCTTATTCTTTTTGCGTGGGGCGGAAAGTTTCGAAGAGCTTAGAACAATTAAACCGTGGTACGAAGGACAACGCATTAAACTTAAAAGCTACTACGTTGACGGTTTAACAGGTGGCGGTGAGTTTGTTGCGCGGTTGACTGTTGGTGTAGATGACAGTGGTGTCATCGCAGCAGGGTCGGGATTCTATTGGGAACGTGTACTCACCGATCCGGTGATCTATCCTGAATATTTTGGCGCCGATACCTCGTTATCTGATAATAGTACGGCACTTAGCACCACCTTTAATTACGCCATCGCCAATAAAAAATCGGTCTGCATTAAAGCGAACATCAAAGTTTCTACGGTAACCATCGCTGGATTTAATTTCACTATTTTTGGGCCGGGGACAATGACCTTCTCTGACCCAAATGGACTTGTTATCAGTAACGGAAACGCCGGTATTATCGACGGGCCTGCTCTCGTTTTTTCCGGGGTAGGTTCAACTGGAATTACCGTAACGGGCTCTAACAATGTCGTGGTTCGAAACTGTACTATTTCGAATCATGGTCGAAATGGTGGGGTCTACATTTTAAACTCCAGCAATGTGATGGTCTCCAAGAATACTTTCCTGAACGCAGCGGGTGATGCGACGTTTGGATCCTCTACCACCGCTGATGTCAATATCTGGGGGACGAATAACGGTTGTTCCGTGGTAGATAACCGGTTTATCTCTGGAGGTGGCTACGCTATTCAGATTCGTTCGCACGCGTTAGGGGATGTTTCAGTTAATCACGTCATCTCAAGAAACTTCATTGACGGTTACAACAGTTACGGAATTAACTGCTACCGAAATAAACAATCGTTGACGGATACGCAGGTATTGAAAAATGTTATTGTTTCTGAAAACGTTATCAGTAACATTTCAGGTAATCGTCCAAGTAACCCAGCTACTCCCGATGTGTTAATCTTCGGTACTGGCATCTACATGCAAGGCTCCGAAATGTCAACGGTTGTCAATAACACAATCACTAATGTGTGTACCAACTCTAACAATGACTTGCTGGCGCCTGCCGGAATTGGGGTCACCAACATCGGTAATATTAATATCGCCAACAACACCATTGTCAACTCGGGGATGTACGGTATTAAAATCAACGACTCTGTCGGTTTAGGCGATGTTTACGGGCGAGTGATTGTTGAGAGTAATATTATTGACACAGTCGGTACCGATGGCATCATGGTCCAGGATCGCAATAACATTTCAGTAACCAACAACTCCATTAAAGGCGCTGCTCGTGACGGAATTAAAATCAATACTTCTCCGTCAAGTCAAACCAAAGTAGTTTCCACCGATAAAAAGATTTCCTTTAACAGCCTCAAAACCATCACGGGGATCGGAATCTATATCGAATATTCTCAAAGCTGGTCTATTGAAAGTAACTGTGTTACCGATTGTGCTCAGGGGTTAGTTTTCCAGTACAGTGCGCACGGTAGAGTGATAGGTAATACTATCGTTAATGCCTCTACGCGGGGCTACTACGCACATGTGACAAACACCACACCGGGATCAATCATTTTTACTGAAAATAAATGCTTGAATACCGTCACGCAAATTGCTGTCGAACATCCGATTGACTACTACAACAACCCGCAATTGACACCGACGGGGACGTACGCTAATGCGAGAGAAATTACAGCGGATTTACCAGATGTTACGGGTTGCGAAGTCCTGAATTTAAAACCCACCGCAGCGATGAATCTGACTGGATTTGCAGGCGGGAAAATTGGGCAGCGCATTACCATATGGGTAAATAATGCATTGGTAACAATGGTACAGAGTGGCTCCTTTATTCTAGCTGGGTTGAAAAATAGAAACCCGGGCTATAACAGCGCTGTAACGTTTGTGAAAACAAAAGCAGGGTGGGTCGAAGTAGCACAAAGTGGGTACGCAGTCGCTTACATTAACCCAACGTCTGGGAGTTCCGTTACTGTCAGTGACTATACTGGAGGAATCTACATCCAAGGTAGTAGTGCACTAGCTAGTCTTTCGGTTACGTTACCTGCTTCCCCCGTGGACGATCAAGTCTGTACTATTTGTTCTCAGAGTGGCGTTACGGCATTGACATTGACGGCAAATACGGGACAAAGTATTTTCCCTCCGACCACACCGACTGCCCTTTCTGCGGGCATTTCTATTCAGTATCGGTATCGGGCGGCGGCTAACGGCTGGTTCCGCTATCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
45a345184040bb915f20a637fb50e4f7dc3a3339585bbf017883f36f09609225
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8490
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50