Protein

View in Explore
Genbank accession
AYD84135.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MARNLGAVFPTKSAAEWAALNPLLQKGQGAFEEDTSALKIGDGSTLYNDLDYFVGSRSEVSPEQVTEAIEAMDLLTAAAANLSYVGTVSAPKDGSTPALAAFQAAVTAAAGRPLFVPPGDYLFNDSLTGRANLTFAPGARILQSVNKPAFELTGTGSQGQTSRGLQSTAAAGQNIVNCNTVGLVVGDWILLRSAEVFPNSVAGSKIGELHRVRQIDGTTQLRTVSNLDYSYAPTTSSVVKFGMMQGVRLLGAGEFLNTIGENMKVPMLRFTACADLVVDASVVGAGGPGVTISADTLFSVRARVRDSFNNESNGNFGYGVEAFGASCHGDVHVDMVGGRHAFTTTSGATTSSVPRHINVTGTAEGLTNTAWDSHEEGEFIHFQGVKAFGCRNGAIKHRAPRSTITNPIVRNCLGIGVRFAPSAYGGALHGGDMREIRYLSEGSPGVGVQIEAPGVSVSGEPRIECDDQAILVIAGGGTSRIRSGTLLPGARGNADTRVGIEYQGISANHRVDRGVSIETPALVGVKAAPTATDIRVAPIRYEGVATRVSGDIHLVTEPSRRKLVSVPGNGATRSSLTNPTSGRAYIAPLTIEDDEPWTALVPTISIATAGAAGDTVEVAIFDTARNRLATTGKQAVLDTAGVKSLPPIAFTPILGRRYLAVTQFVTSGNTLVIHAGSFANTAGTVLAGNTDDTYDVAYFAAANPLPALLASAPVVGAISVYPWVQFTAV
Physico‐chemical
properties
protein length:729 AA
molecular weight: 75707,26000 Da
isoelectric point:5,99529
aromaticity:0,06584
hydropathy:0,04623

Domains

Domains [InterPro]
SSF69349
STR
8–56
SSF69349 IPR011050 DC_1203
DC_0999
STR
8–420
DC_0999
IPR012334
STR
89–435
IPR012334
AYD84135.1
1 729
Architecture
STR
RBD
STR 8-435 | RBD 437-729
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYD84135.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9831
Central domain 99 555 458 0,9921
C-terminal 556 729 173 0,9927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-98
Central
99-555
C-terminal
556-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Jifall16
[NCBI] 		2315532 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD84135.1 [NCBI]
Genbank nucleotide accession
MH779508 [NCBI]
CDS location
range 9953 -> 12142
strand +
CDS
ATGGCGAGGAATCTGGGGGCAGTGTTCCCGACCAAGTCGGCCGCGGAGTGGGCCGCGCTCAACCCGCTGTTGCAGAAGGGTCAAGGGGCCTTCGAGGAGGACACCAGCGCGCTGAAGATCGGCGACGGGTCCACGCTGTATAACGACCTCGACTACTTCGTCGGCTCTCGATCGGAGGTGAGTCCTGAGCAGGTCACGGAGGCCATCGAGGCGATGGACCTCCTCACGGCGGCTGCCGCGAATCTGTCGTACGTCGGCACAGTGAGCGCCCCGAAGGACGGCTCTACGCCTGCCCTCGCAGCGTTCCAGGCAGCGGTGACTGCGGCTGCTGGTCGGCCGCTCTTTGTGCCACCGGGGGACTATCTGTTCAACGACTCCCTCACCGGCCGAGCCAATCTCACCTTCGCTCCGGGAGCCCGGATCTTGCAGTCGGTGAATAAGCCTGCGTTCGAGCTGACCGGCACCGGATCACAAGGGCAGACCTCGCGAGGTCTGCAATCGACGGCGGCTGCCGGACAGAACATCGTCAACTGCAACACCGTCGGGCTGGTCGTCGGAGATTGGATTCTCCTGCGGTCGGCCGAGGTCTTCCCGAACAGCGTGGCCGGGAGCAAGATCGGTGAGCTGCATCGGGTTCGCCAGATCGACGGCACCACTCAGCTCCGCACGGTAAGCAACCTCGACTACTCCTACGCACCGACGACGTCGTCGGTGGTGAAGTTCGGGATGATGCAGGGGGTTCGGCTCCTCGGCGCCGGGGAGTTCCTCAACACCATTGGTGAGAACATGAAGGTCCCGATGCTGCGATTCACCGCGTGTGCGGATCTGGTGGTCGACGCCTCGGTGGTCGGGGCGGGAGGACCCGGCGTGACGATCTCGGCTGACACCCTTTTCTCGGTGCGTGCCCGGGTGCGCGATTCGTTCAACAACGAGTCCAACGGCAACTTCGGCTACGGGGTCGAGGCCTTCGGTGCGTCCTGTCACGGGGACGTCCACGTCGACATGGTCGGAGGCCGACACGCTTTCACCACGACGTCGGGAGCGACCACCTCGTCGGTGCCTCGCCACATCAACGTGACGGGAACGGCCGAGGGCCTGACCAACACCGCATGGGACTCCCATGAAGAGGGCGAGTTCATCCACTTCCAGGGGGTGAAGGCCTTCGGCTGCCGCAACGGTGCGATCAAGCATCGAGCGCCGCGTAGCACCATCACCAACCCGATCGTGCGAAACTGCCTCGGGATCGGAGTGCGGTTCGCGCCGTCGGCCTACGGCGGGGCCTTGCACGGCGGGGATATGCGTGAGATCCGGTATCTCTCCGAGGGTTCCCCTGGCGTCGGCGTGCAGATCGAAGCCCCCGGGGTCAGCGTCAGCGGAGAGCCCCGGATCGAATGTGACGACCAGGCGATCTTGGTGATCGCCGGAGGCGGGACCTCGCGCATTCGCTCTGGCACCCTTCTCCCCGGAGCCCGAGGGAATGCGGACACCCGGGTCGGTATCGAATACCAAGGCATCTCCGCGAACCACCGGGTGGACCGAGGGGTGTCGATCGAAACCCCTGCTCTTGTCGGGGTAAAGGCTGCGCCGACCGCCACTGACATCCGCGTCGCGCCGATCCGGTACGAGGGAGTGGCGACCCGGGTCTCCGGGGACATTCACTTGGTGACTGAGCCTTCTCGGCGCAAGCTCGTGAGCGTGCCCGGAAATGGGGCGACCCGGTCTTCCTTGACGAACCCGACGAGCGGCCGAGCCTATATCGCGCCGCTGACGATCGAGGATGACGAGCCCTGGACTGCACTCGTGCCGACAATCTCCATTGCCACCGCGGGGGCAGCAGGAGATACCGTCGAGGTCGCGATCTTCGACACGGCGCGAAACCGGCTCGCGACCACCGGAAAGCAGGCGGTTCTCGACACAGCCGGGGTGAAGAGCCTTCCGCCGATCGCCTTTACGCCAATTCTGGGACGTCGGTACCTGGCCGTCACCCAGTTCGTAACCTCGGGAAACACCCTGGTTATCCATGCAGGCAGTTTCGCCAACACCGCCGGGACGGTCCTGGCCGGGAATACCGACGACACCTACGACGTAGCCTACTTCGCTGCGGCGAACCCGCTCCCCGCACTACTGGCAAGTGCGCCGGTCGTCGGTGCGATCTCGGTCTACCCGTGGGTCCAGTTCACCGCGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e5ca14131ccad7a6d9f938049a7c08d4a3ee13a3df27b6055af2af3eb61a1b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50