Protein

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Genbank accession
XYR95548.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MSKIQVNEIVNHFDTGAPDCPKGLTVTGFTTYTGGASFSGDVSIGGTLTYEDVTNIDSVGVITARNGIEVTGGNVHIAGAGSTIGVGTAYIGSIEVTGGNVHIAGVGATLGVTTAYISSINDLGYPSAGPLSNRNMVINGAMQVAQRGNTVSSINSGTGYYTADRFRLDVSMGTWTSDRMTNSQGDTYESGSTERFRNSLRLTCTAGQASPGATDNVKIVYFIEGQDVQHLDYGTSNAKTMTLSFWVRSTKTGTGTLELIQEDNSDRQYSASYTINATNTWEQKVITIPGDTSGLINNDSGRGLDIIWWLNSGSTFTGGSQGGWRALVNNNRNSDNLAIGSANDDEFFLTGVQLEVGTRATPFEHRSYSDMLDKCQRYFQQIGQLGRLFGAASSPTTLVFPLSLASSMRGTPVFRNNTISQIYRYDATNISFGSATFSVGNFSELKPTLDYTVSNVSVNDNAVYWLTFTSLQLDAEL
Physico‐chemical
properties
protein length:477 AA
molecular weight: 50975,56900 Da
isoelectric point:4,82798
aromaticity:0,09224
hydropathy:-0,21887

Domains

Domains [InterPro]
DC_0568
STR
24–477
DC_0568
G3DSA:2.60.120.260
STR
222–323
G3DSA:2.60.120.260
XYR95548.1
1 477
Architecture
STR
STR 24-477
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95548.1
1 477
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,7800
Central domain 41 239 200 0,2707
C-terminal 240 477 237 0,9299
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-239
C-terminal
240-477

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RN05-S
[NCBI] 		3412547 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95548.1 [NCBI]
Genbank nucleotide accession
PV261924.1 [NCBI]
CDS location
range 32188 -> 33621
strand -
CDS
ATGTCTAAGATCCAAGTAAATGAGATTGTAAATCATTTTGATACTGGTGCACCTGATTGTCCCAAGGGTCTGACTGTCACTGGTTTCACTACTTATACTGGTGGTGCATCCTTTAGTGGTGATGTATCAATTGGTGGTACACTGACTTATGAAGATGTAACTAATATTGATTCTGTTGGTGTCATTACTGCACGTAATGGTATTGAAGTTACAGGAGGTAATGTTCATATTGCAGGTGCAGGTTCTACAATCGGCGTAGGAACAGCATACATTGGAAGTATTGAAGTTACTGGAGGTAATGTTCATATTGCGGGTGTTGGTGCTACACTTGGTGTAACAACGGCATATATTAGTAGTATCAATGACCTAGGTTATCCTTCTGCTGGACCATTAAGTAATCGTAATATGGTTATTAATGGTGCGATGCAGGTTGCACAACGCGGTAATACTGTATCATCCATTAATTCTGGCACTGGTTATTACACCGCCGATCGTTTTAGACTTGATGTTTCTATGGGAACTTGGACATCTGACAGGATGACTAACTCTCAAGGTGATACTTATGAAAGTGGTTCAACTGAACGTTTCCGTAATTCATTGAGATTAACTTGTACCGCAGGACAAGCATCTCCAGGTGCAACTGATAATGTCAAAATTGTATACTTCATTGAGGGTCAAGATGTACAACATCTTGACTATGGGACTTCAAATGCAAAAACAATGACTTTATCCTTTTGGGTAAGGTCAACTAAAACTGGTACTGGCACTCTTGAATTAATTCAAGAAGATAACAGTGATAGACAGTATAGTGCAAGTTACACGATTAATGCTACAAACACTTGGGAGCAAAAAGTAATTACCATTCCTGGAGATACTTCTGGTCTTATTAATAATGATAGTGGTCGTGGTTTAGACATTATTTGGTGGTTAAATAGTGGTTCTACCTTTACAGGAGGGTCACAAGGAGGGTGGAGAGCACTTGTTAATAATAATCGTAATTCAGATAACCTTGCTATTGGTTCTGCAAATGATGATGAATTTTTCCTCACTGGTGTTCAATTAGAAGTAGGCACCAGAGCCACGCCTTTTGAACATCGGAGTTATAGTGATATGCTTGATAAGTGTCAGAGATATTTTCAACAGATTGGGCAGCTGGGAAGACTTTTCGGTGCCGCATCTTCACCAACAACTTTAGTGTTTCCTCTTTCACTAGCATCTTCGATGAGGGGCACTCCCGTGTTTAGGAACAATACTATTTCTCAGATATATAGGTATGACGCAACGAACATAAGTTTTGGTAGCGCCACATTTTCCGTCGGCAATTTTTCGGAACTTAAGCCAACATTGGATTACACAGTAAGTAACGTTTCAGTAAATGATAATGCGGTTTATTGGTTGACATTCACTAGCCTACAACTCGATGCCGAACTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
31bf23ec319c8a68e2c832641df38aaff9665498800d8a72e8a38891e85abd20
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8891
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50