Protein

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Genbank accession
XPA09017.1 [GenBank]
Protein name
neck protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MYKIKDIETRINNKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLFTEDGSIFKNEPVLIDDNVKGFLTYKIPKNVIKHIGMVRCKLLLENDHERIHVANFRFYIIDSGIDDAVQKEVSITLVEDTVKRIIRTNASELLGDDFKETLNTTAKQYIAENADKFKGERGERGEKGEVGERGAEGVIRFENLTQEQRNELKGEAGENIIKDNAVTYNKTDFIKTGKNIFDTTDIEVGRIVSNTTGIVSDSAYYVTSKFLPVAPNTVYTQNYADPIAFYDINKTFISGLARVTNPKGSRTFTTPTNAYYIKATSIKEGVDTYNYKVYQIEKNDKYTGYEPFKLNLPQLDINLKSESVVNENVKNNTISIDKLSFSESSSNLFNPSDITAGVYVNPTTGALSTNANYVSSNFIDITGATSLSKNNTNNLYAFYDTNKNFIKTSTTSTNTITVPSNAIFIRMSATTSATNGTMIVKGDSLPSNFIEYKRYIPSKYLEVSSFSANKDKEYPDSYGKCNLQTYTAEISKLFDPNANTRTEIAIIGDSWVQGGEFKAGDRLTLPLRDRMTKLYGDAGIGFVGLANNHVGNGSVTVSTTGNWTQYDEGLGNISQSKGIDSATIESSTKGDSIKVTFAEDVDYYEVHTLNTGQWRYNIDGNEWVNIDATSQEVTPITTNLGKHTINIEIVSGTVTFVGSYAYKGNKGVVIHKVGNGGLRASHVASTDRDNYIKQLKRCKANTFGILLGTNDMVGNVPISDYERDMKEIISRIKQAKPNASIFLIAPSGNKYTGTLHTIEDYSNKQCDIAKELKIGHVSLYRNLGNFDLTKTNELMYSDGVHPNKIGGYAISNVIYDRLLRI
Physico‐chemical
properties
protein length:864 AA
molecular weight: 96124,43380 Da
isoelectric point:6,16069
aromaticity:0,09375
hydropathy:-0,46563

Domains

Domains [InterPro]
DC_0885
STR
1–745
DC_0885
IPR018913
ATT
4–143
IPR018913 IPR036514
G3DSA:2.60.40.3350
ATT
6–125
G3DSA:2.60.40.3350 SSF52266
G3DSA:2.60.120.1360
Unmapped
582–709
G3DSA:2.60.120.1360 IPR013830
cd00229
ENZ
704–859
cd00229
XPA09017.1
1 864
Architecture
ATT
STR
ATT 1-143 | STR 144-863 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPA09017.1
1 864
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9901
Central domain 243 476 235 0,6384
C-terminal 477 864 387 0,2429
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-476
C-terminal
477-864

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_Sau_IS1
[NCBI] 		3401638 Viruses >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPA09017.1 [NCBI]
Genbank nucleotide accession
PV069681 [NCBI]
CDS location
range 26110 -> 28704
strand -
CDS
ATGTACAAAATAAAAGACATTGAAACGCGAATAAATAACAAAACTGTTGATATCGGCGACATCGGTTGTCGCTTCTACACAGAAGACGAAAACACAGCTTATGTCAGAATCGGAATCAACGATGAAAAAGGCAGAATCAACTTCAAAGAAAGTAATTTGACACCTAAGTTACATCTGTTCACGGAAGATGGTTCTATATTCAAAAATGAACCCGTTTTAATCGACGATAATGTAAAAGGGTTCCTTACCTACAAGATACCTAAAAACGTCATTAAACACATTGGTATGGTTCGTTGTAAGTTACTTTTAGAGAATGACCACGAAAGAATACACGTCGCAAACTTCCGTTTCTACATTATCGATAGTGGTATAGACGACGCAGTGCAAAAAGAAGTGTCTATCACACTAGTTGAGGATACTGTAAAAAGAATTATCCGTACAAACGCTAGTGAATTATTAGGAGACGACTTCAAAGAAACGTTAAACACAACTGCTAAGCAATACATCGCTGAAAATGCAGACAAGTTTAAGGGCGAGCGTGGCGAACGTGGGGAAAAAGGAGAAGTGGGCGAACGAGGTGCTGAGGGTGTTATAAGGTTTGAAAATTTAACTCAAGAACAACGAAATGAGTTAAAGGGAGAAGCGGGCGAAAACATTATTAAAGATAATGCCGTTACTTATAACAAAACAGATTTTATCAAAACTGGTAAGAATATTTTTGATACTACCGATATTGAAGTAGGTAGGATTGTTAGCAACACAACAGGAATAGTGAGTGATAGCGCTTATTATGTAACAAGTAAATTTTTGCCGGTAGCTCCTAATACGGTATACACGCAAAATTATGCAGACCCAATCGCTTTTTACGATATCAACAAAACGTTTATATCTGGATTAGCTCGTGTCACAAATCCAAAAGGCTCTAGGACTTTTACCACACCTACAAACGCATACTACATTAAAGCAACAAGCATTAAAGAGGGTGTAGACACATATAATTACAAAGTGTATCAAATCGAAAAAAACGATAAATATACTGGTTATGAACCTTTCAAATTAAACTTGCCTCAATTAGACATCAATTTAAAATCCGAAAGTGTAGTAAATGAAAATGTTAAAAACAACACGATTTCAATTGATAAGTTGAGTTTTTCAGAAAGTTCGTCAAATTTATTTAACCCTAGTGATATTACCGCTGGCGTTTATGTTAACCCCACAACAGGCGCGCTAAGTACAAATGCGAATTACGTATCAAGTAATTTCATCGATATTACAGGTGCTACATCTCTATCTAAAAATAATACTAACAACTTATACGCTTTTTATGATACAAACAAAAACTTTATCAAAACTAGCACGACATCAACAAATACAATTACAGTTCCTAGTAATGCTATTTTTATAAGAATGTCTGCAACAACTAGCGCAACCAACGGAACAATGATTGTAAAAGGCGACAGTCTGCCATCGAATTTTATAGAGTATAAACGCTATATACCTAGCAAATATTTAGAGGTATCAAGTTTTTCAGCTAATAAAGATAAAGAATATCCAGACAGTTACGGTAAATGTAACTTACAAACATATACCGCTGAAATAAGTAAACTTTTCGACCCCAATGCAAATACTAGGACTGAAATAGCTATCATTGGCGATAGTTGGGTACAAGGTGGCGAATTCAAAGCGGGAGATCGTTTGACATTACCATTAAGAGACAGAATGACAAAATTGTACGGCGATGCTGGTATAGGGTTTGTCGGATTAGCTAATAACCATGTTGGAAATGGTTCTGTAACTGTTAGCACAACAGGCAACTGGACACAGTACGATGAGGGATTAGGTAATATTTCGCAGTCTAAAGGAATAGATAGCGCCACGATTGAAAGTAGCACAAAAGGCGACAGCATCAAAGTTACTTTTGCCGAAGACGTTGACTATTACGAAGTTCATACGCTTAACACAGGACAATGGCGCTACAACATCGACGGTAATGAATGGGTAAATATTGATGCAACATCACAAGAAGTTACACCAATTACAACCAACTTAGGCAAACACACGATCAACATCGAAATTGTAAGTGGAACAGTAACATTCGTAGGCTCATACGCATATAAAGGTAATAAAGGCGTGGTTATCCATAAAGTTGGAAACGGTGGTTTGAGAGCTTCTCATGTCGCTAGTACAGATAGGGATAACTACATTAAACAATTGAAACGTTGTAAAGCTAATACTTTTGGCATTTTGCTTGGAACGAATGATATGGTCGGCAATGTTCCTATTTCAGATTATGAAAGAGATATGAAAGAAATCATTTCAAGGATTAAACAAGCGAAGCCGAACGCGAGTATTTTCTTAATTGCACCAAGTGGCAATAAATACACAGGCACATTGCACACAATCGAAGATTACAGTAATAAACAGTGTGACATAGCCAAAGAATTAAAAATAGGACATGTGAGTCTATACAGAAACTTAGGTAATTTTGATTTAACTAAAACAAATGAATTAATGTATTCCGACGGTGTGCATCCCAACAAAATAGGTGGGTACGCAATCTCAAATGTAATATACGACAGATTATTAAGAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0c378279eff56ac5d42b64809e2193d2b1336ba71908ac1a52e3b8ce6eb7410
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and host range prediction of Staphylococcus aureus phages through receptor-binding protein analysis Krusche,J., Beck,C., Lehmann,E., Gerlach,D., Daiber,E., Mayer,C., Mueller,J., Onallah,H., Wuerstle,S., Wolz,C. and Peschel,A. 2025 — GenBank