Protein

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Genbank accession
YP_009197537.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MYDFRETTPFTGSDDNQRPAEAMLIDGQYIEDLIPGYSTLQVSGRELLSQSIEKQTIGKSDGDFIQYARNPSREIVVGYRLAASDNLSFRQAFYKLNSILHGDSHQVSFNDDPSKYWIATFSDIDDVPKGRNAITSSFTLFVPDGIAHSVSTQTADNMPYKDVPVNLLTGTSTPIQRTGNGTTNNVVSAYKFGGKQLKDIIGAGTSLVLSFDWSVSDQGALGNFTAQLNAAPWSFGVDTNISSGSGHYYASSPIGSDMKASTADGIQIRMDNVTTTITISNMKLGTTDSPWSPNPADPEYYSDTITVPNAGTYPSEPVIEATINGDDGVLTAINDQGSVLQFGSPDETDGFVKQKSERVYHLDFNQTPTGVTLNNGVTAFPYYEHGNDANVQSGPFGYANGIAYPSTERTASNYWNGPSMSGIIPKNSNGSNTANFQFVNRVNVDTSGPEVGRFEFNLTYKSKIVASLALFDDSPANDQLVFSGTLFDGKDAKMVFFDLLPRNYYRGGNYNAVITKMGNKLTFRLDRLDLGDGGIEPVDIGGFPAMPIDGWTAWFPGFSDQRGWSINWQDSYFEWINVDYWDDIPNRFKDGDVVKIDVSNRRVLVNGFEDRTLQTIGNDWGGFKIHPGDNTIRLLTSNWAKQCKAEVSWQEAWL
Physico‐chemical
properties
protein length:654 AA
molecular weight: 71930,44480 Da
isoelectric point:4,58903
aromaticity:0,11621
hydropathy:-0,43226

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–148
G3DSA:2.40.30.200 DC_0420
IPR006520
Unmapped
37–148
IPR006520 IPR054064 IPR054738
IPR008841
STR
44–132
IPR008841 G3DSA:2.60.120.860
YP_009197537.1
1 654
Architecture
ATT
STR
ATT 1-148 | STR 238-654
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009197537.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,9974
Central domain 175 373 200 0,4922
C-terminal 374 654 280 0,2812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-373
C-terminal
374-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage iLp84
[NCBI] 		1739610 Uroviricota > Caudoviricetes > Pleetrevirus >
Host Lactobacillus paracasei
[NCBI] 		1597 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009197537.1 [NCBI]
Genbank nucleotide accession
NC_028783 [NCBI]
CDS location
range 14079 -> 16043
strand +
CDS
TTGTATGATTTCAGAGAAACAACGCCCTTCACGGGTTCTGATGATAATCAGCGCCCAGCAGAGGCGATGCTAATAGATGGCCAGTACATTGAAGACTTGATTCCGGGTTATAGCACGCTGCAAGTCAGTGGCCGAGAACTACTAAGCCAGTCAATCGAAAAACAAACGATTGGCAAGTCAGATGGTGATTTCATCCAGTATGCTCGTAACCCTTCTCGTGAGATTGTTGTCGGCTACAGGCTGGCAGCATCGGACAATCTTTCGTTCCGGCAAGCATTCTATAAGCTCAACAGCATCCTTCATGGCGATAGTCATCAGGTTTCTTTCAACGATGACCCATCAAAATATTGGATTGCTACTTTTTCTGATATTGACGATGTTCCTAAAGGCCGGAATGCGATCACTTCCTCATTTACTTTGTTTGTTCCCGATGGCATCGCCCACTCGGTATCCACGCAGACGGCTGACAACATGCCATACAAGGACGTGCCAGTGAATTTGTTGACGGGGACAAGTACTCCGATACAGAGAACTGGTAACGGGACCACCAACAATGTAGTTTCAGCTTATAAGTTTGGGGGTAAACAATTAAAAGATATTATTGGGGCAGGTACAAGTTTGGTATTAAGCTTTGACTGGTCAGTCTCAGACCAAGGAGCACTAGGCAATTTCACAGCTCAACTAAATGCTGCACCATGGTCCTTCGGGGTAGACACCAATATATCTAGTGGGTCAGGGCATTATTATGCATCATCCCCCATAGGTTCGGATATGAAGGCCTCTACTGCGGATGGTATTCAAATTCGAATGGATAATGTTACAACAACAATAACAATATCTAATATGAAGCTTGGCACCACTGATTCTCCATGGTCGCCTAACCCAGCGGATCCTGAATACTATTCCGACACCATCACAGTGCCTAATGCTGGGACTTATCCATCTGAACCAGTTATCGAGGCTACTATCAACGGTGATGACGGCGTACTAACTGCTATTAATGATCAGGGCAGTGTGCTACAGTTCGGCTCTCCCGATGAGACTGATGGCTTTGTGAAACAAAAGTCTGAACGCGTTTATCATCTCGATTTCAATCAGACACCGACAGGGGTAACACTCAATAATGGGGTTACGGCTTTTCCTTACTATGAGCATGGCAATGATGCCAACGTACAGTCGGGACCGTTTGGATATGCAAATGGTATTGCCTACCCGTCTACTGAACGAACCGCTTCCAATTACTGGAATGGGCCTTCAATGAGCGGCATCATTCCGAAAAATTCGAATGGCTCTAACACGGCTAATTTTCAGTTTGTAAATCGTGTCAACGTTGATACGAGCGGTCCTGAAGTCGGTCGGTTTGAGTTCAACTTGACGTACAAAAGCAAGATAGTTGCCTCACTCGCCTTGTTTGATGACAGCCCAGCAAATGACCAGCTTGTCTTTTCGGGAACCCTTTTTGATGGCAAGGATGCCAAAATGGTTTTCTTCGATCTATTGCCACGAAATTACTATCGTGGGGGTAACTACAATGCCGTGATAACCAAAATGGGTAACAAGCTAACCTTTCGCTTAGATCGTCTTGATTTAGGCGATGGTGGTATTGAGCCAGTTGACATAGGGGGCTTCCCTGCCATGCCGATTGACGGTTGGACAGCATGGTTCCCGGGATTCTCCGATCAACGTGGTTGGTCCATTAACTGGCAAGATAGCTACTTTGAGTGGATTAACGTTGATTACTGGGACGACATTCCTAACCGATTTAAAGACGGTGACGTTGTGAAAATCGATGTTTCTAATCGGCGTGTCCTTGTTAACGGTTTTGAAGATCGAACACTGCAAACAATCGGCAATGATTGGGGTGGATTCAAGATACATCCAGGTGATAACACGATTCGCCTGCTTACTTCAAATTGGGCAAAGCAGTGTAAGGCTGAAGTATCTTGGCAGGAGGCGTGGCTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
84cc087c16cf3bd89c686b0f26613bde8c2b28728173965f21831e8abe16102d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50