Protein

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Genbank accession
QLF85788.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MALISQSVKNLKGGISQQPDILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLIHLINRDSVEQYYVVFTGQSVRVFDLNGKEYTVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADKTPLYTLKENGDCLINVRGGQYGRTLAFTINNVRIEYKIAQGDKPEHVQETDAQWLVKKLAGLARAHGSFKDWRFDEGSGFIHVIAPGNSQINQLSTEDGYANQLMNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDMFYVQYDNVKKVWKEVAGWGVEKGLNGGTMPHALVRQSDGSFQMQVLPWAQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSASGILSPKTVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFNDEPYRLYIDNKVKHVIPKGAYNDDTYTTTIKPVDIYGMKYWTGRFYIVASDGMVSWFDPPRGGWPNGVPVLSMSGNREDETIYVGLAINFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRTGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSXI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 88372,64250 Da
isoelectric point:6,69696
aromaticity:0,11125
hydropathy:-0,29241

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
QLF85788.1
1 792
Architecture
TTP
TTP 1-791 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF85788.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9959
Central domain 141 344 205 0,1023
C-terminal 345 792 447 0,2249
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-344
C-terminal
345-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PhiV-1
[NCBI] 		2744002 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF85788.1 [NCBI]
Genbank nucleotide accession
MT542512 [NCBI]
CDS location
range 23588 -> 25966
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGGACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGCTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCAAAACCGCTCATCCATTTAATCAACCGTGATAGCGTAGAACAGTATTACGTTGTGTTCACAGGACAGTCAGTCCGAGTGTTCGACCTCAATGGCAAAGAGTACACAGTGAAAGGTGACTTGAGCTACGTGAAGGTAGGGAACCCGCGTGATGACCTGCGAATGGTAACGGTTGCTGACTATACGTTTATCGTCAACCGCAACATGGTGGTTCGTGCCGATAAGACACCACTCTATACTCTGAAAGAGAACGGAGACTGTTTGATTAACGTTCGTGGTGGACAGTATGGGAGAACGCTTGCATTTACAATAAACAACGTTCGAATTGAGTACAAGATTGCACAAGGAGATAAGCCTGAACATGTACAAGAGACCGATGCACAGTGGCTCGTTAAGAAACTGGCAGGTCTTGCTCGTGCTCACGGTTCCTTCAAGGACTGGAGGTTCGACGAAGGGTCTGGCTTCATCCACGTAATCGCTCCGGGTAACAGTCAGATTAACCAGCTGTCCACTGAGGATGGCTATGCTAACCAGTTGATGAACGCGGTAATGCACACAAGCCAGTCATTCAGTAAGTTGCCAATCGAGGCTCCTAATGGGTACACTGTGAAGATTGTTGGTGACACCTCTAAGACTTCCGACATGTTCTATGTCCAGTATGACAACGTGAAGAAAGTCTGGAAGGAAGTCGCCGGATGGGGAGTTGAGAAGGGTCTCAATGGAGGCACTATGCCACACGCATTGGTTCGTCAGTCTGATGGTTCCTTCCAGATGCAGGTGCTACCGTGGGCGCAACGAACTTGTGGTGACATGGATACTAACCCGACTCCATCCATCGTGGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCTCGTACCTCTAAGTATTTCTCACTGTTCCCTGCGTCAGTAGCTAACCTGTCCGACGATGACCCGATTGATGTGGCTGTATCTCACAACCGTATCTCAATCCTGAAGTATGCCGTACCGTTCTCTGAAGAGTTGCTGCTATGGTCTGACCAAGCACAGTTCGTCCTGAGCGCTTCCGGTATCCTATCACCGAAGACAGTTGAGTTGAACCTTACGACCGAGTTCGATGTGTCCGACCGAGCGAGACCTTTTGGCGTTGGGCGTGGTGTGTACTTTGCGTCACCTCGTGCTTCCTACACGTCACTGAACCGTTACTATGCGGTACAGGATGTTAGCTCCGTGAAGTCTGCTGAGGATATGAGTGCTCACGTTCCAAGTTACATTCCGAACGGTGTGTTCTCCATTCGCGGCTCCGGTACTGAGAACTTTATCTCCGTGCTCTCTGCGAACGCCCCAAGTAAAATCTTCCTATATAAGTTCCTCTACTTGAATGAAGAGATTGCCCAACAGTCGTGGTCTCATTGGGAACTTGGTAGTAACGTAACGGTTCTGGCTTGTGACTCTATCGGCTCAACGATGTACCTTGTGTTGCGCAATCAGTCACACACTTGGATGTGCCGAGCACACTTTACGAAGAACTCCATTGACTTCAACGATGAACCATATCGGCTGTACATCGACAACAAGGTCAAGCATGTGATTCCTAAAGGTGCGTACAACGATGACACCTACACGACCACTATCAAGCCTGTGGACATCTACGGTATGAAATATTGGACTGGTAGGTTCTACATCGTGGCCTCTGATGGTATGGTCTCGTGGTTCGACCCTCCGCGTGGTGGTTGGCCTAATGGTGTCCCTGTGTTGTCAATGAGTGGGAACCGTGAGGATGAGACAATCTACGTCGGCTTGGCTATCAACTTCCGTTATGTGTTCTCTAAGTTCCTCATCAAGAAGACTGCTGATGATGGCTCGACAGCTACCGAGGACATTGGGCGCTTGCAATTACGCCGAGCGTGGGTGAACTATGAGGACTCTGGTGCATTCACTGTAGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGACATGGCGGGTGCTCGCTTGGGTTCCAATGCGTTACGCACTGGTGGACTTAACGTTGGTACTGGTCAGTTCCGATTCCCGGTTGCTGGCAACGCACAGTTGAACGAAGTAAGGATTATCTCTGACCACACTACACCACTTAACGTGATTGGCTGTGGATGGGAAGGTAACTACCTACGACGCTCTTCTRGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6f9b1e09fa8dceefc09caea245d2047d070a87332e37174deab2ad1fb0f5dbe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8625
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse enzymatic activities mediate antiviral immunity in prokaryotes Gao,L., Altae-Tran,H., Bohning,F., Makarova,K.S., Segel,M., Schmid-Burgk,J.L., Koob,J., Wolf,Y.I., Koonin,E.V. and Zhang,F. 6507 32855333 GenBank