Protein

View in Explore

Genbank accession

XLQ28991.1 [GenBank]

Protein name

tail sheath protein

RBP type

TSP

Evidence DepoScope

Probability 0,92

Protein sequence

MSLLSPGVELKETTVQSTVVNNSTGTAALAGKFQWGPAFQIKQITDEVALVDMFGTPNTDTADYFMSAMNFLQYGNDLRVVRAVDRDTAKNSSPVAGNIEFTISAAGSNYAVGDKIIVKYLSETVEADGYVTSVDVDGKILNIYIPTGKIIARAKEINEYPALGSNWTAEVAGSSSGLSGVITIGSIVTDSGILLTEVETSEEAITSLTFQESIKKYGVPGVVALYPGELGDRLEIEIVSKADYDKGASAQLKIYPDGGTRASTAKAIFGYGPQTDDQYAIIVRRNDAVVQSVVLSTKRGERDIYGSNIFIDDFFAKGASNYIFATAQGWPKGFSGVIKLSGGLSSNETVDAGDLMEAWDLFADRESVNAQLFIAGSCAGESLEVASTVQKHVVAIGDSRQDCLVLCSPPRATIVGIPVNRAVDNLVDWRTASGSYTDNNFNVSSTYAAIDGNYKYQYDKYNDVNRWVPLAADIAGLCARTDNISQPWMSPAGYNRGQILNVIKLAIETRQPQRDRLYQEAINPVTGTGGDGYVLYGDKTATSVPSPFDRINVRRLFNMVKTNIGSASKYRLFELNNAFTRSSFRTETSQYLQGIKALGGVYNFKVVCDTTNNTPAVIDRNEFVATFYLQPARSINYITLNFVATATGADFDELIGAVGG

Physico‐chemical properties

protein length:	660 AA
molecular weight:	71232,97420 Da
isoelectric point:	4,82145
aromaticity:	0,09545
hydropathy:	-0,10955

Domains

Domains [InterPro]

IPR052042
Unmapped
3–643

IPR052042

IPR054564
TAS
24–82

IPR054564 IPR054565 DC_1554 IPR035089 IPR020287

G3DSA:2.40.10.380
ATT
98–188

G3DSA:2.40.10.380 IPR035326

G3DSA:3.40.50.11780
STR
314–510

G3DSA:3.40.50.11780

XLQ28991.1

1 660

Architecture

TAS

ATT

STR

TAS

TAS 24-82 | ATT 97-188 | STR 189-510 | TAS 511-541 | TAS 544-645 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR052042	Unmapped	-	3	643	InterPro	Tail sheath structural protein	-	-	-	-
IPR054564	TAS	DC_0229	24	82	InterPro cluster	Tail sheath protein Gp18-like, domain III N-terminal region	N-terminal	High	Text match	16 proteins / 16 hits
IPR054565	TAS	DC_0242	97	188	InterPro cluster	Tail sheath protein Gp18-like, domain I	N-terminal	High	Text match	12 proteins / 12 hits
G3DSA:2.40.10.380	ATT	G3DSA:2.40.10.380	98	188	Merged direct domain	G3DSA:2.40.10.380	N-terminal	Low	Positional only	11 proteins / 11 hits
DC_1554	STR	DC_1554	188	332	Novel HMM	DC_1554	Central	Low	Positional only	15 proteins / 15 hits
IPR035326	TAS	DC_0530	201	344	InterPro cluster	Phage tail sheath protein-like, beta-sandwich domain	Central	High	Text match	3 proteins / 3 hits
G3DSA:3.40.50.11780	STR	G3DSA:3.40.50.11780	314	510	Merged direct domain	G3DSA:3.40.50.11780	Central	Low	Positional only	39 proteins / 39 hits
IPR035089	TAS	DC_0885	350	541	InterPro cluster	Tail sheath protein, subtilisin-like domain	Central	High	Text match	30 proteins / 30 hits
IPR020287	TAS	DC_0666	544	645	InterPro cluster	Tail sheath protein, C-terminal domain	C-terminal	High	Text match	43 proteins / 43 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XLQ28991.1

1 660

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	91	91	0,9853
Central domain	92	318	228	0,5719
C-terminal	319	660	341	0,1979

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-91

Central
92-318

C-terminal
319-660

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage CAU_ECP01 [NCBI]	3384776	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

XLQ28991.1 [NCBI]

Genbank nucleotide accession

PQ572755 [NCBI]

CDS location

range 44357 -> 46339
strand -

CDS

ATGTCACTTCTCTCTCCGGGCGTTGAGCTCAAAGAAACTACCGTACAGAGTACTGTAGTTAATAACTCCACTGGTACTGCTGCTCTGGCTGGAAAATTCCAATGGGGCCCTGCATTCCAGATTAAACAAATCACCGATGAAGTTGCATTGGTTGATATGTTTGGTACTCCTAATACGGATACAGCAGATTATTTCATGTCTGCTATGAACTTCCTTCAATACGGTAATGACCTTCGTGTTGTACGCGCAGTTGATCGTGATACTGCTAAGAACTCATCTCCTGTAGCAGGCAATATCGAATTCACAATCTCAGCTGCAGGTAGTAACTATGCGGTTGGTGATAAAATTATCGTTAAGTATTTGTCCGAAACTGTTGAAGCAGATGGTTATGTCACTTCAGTTGATGTCGATGGTAAAATCCTTAACATTTATATCCCAACCGGTAAAATTATTGCTCGTGCAAAAGAAATTAATGAATATCCGGCATTAGGTTCTAACTGGACCGCCGAAGTTGCCGGTTCTTCTTCTGGACTCTCTGGCGTTATTACAATTGGTTCTATCGTAACCGATTCAGGTATTCTGTTGACTGAAGTTGAAACTTCAGAAGAAGCTATTACTTCTCTAACTTTCCAAGAATCTATTAAAAAATATGGTGTCCCAGGCGTAGTTGCTCTTTATCCTGGTGAACTTGGCGACCGGCTCGAAATTGAAATCGTATCTAAAGCAGACTATGACAAAGGTGCTTCAGCCCAGTTAAAAATTTATCCTGATGGTGGTACTCGCGCATCTACTGCTAAAGCAATCTTTGGGTATGGCCCACAAACTGATGACCAATATGCGATTATCGTTCGTCGTAACGATGCTGTAGTCCAGAGTGTAGTTCTTTCTACTAAACGCGGTGAACGCGATATTTATGGTAGTAATATCTTTATTGATGATTTCTTTGCTAAAGGCGCAAGCAATTATATTTTCGCTACTGCACAAGGTTGGCCAAAAGGTTTCTCTGGTGTAATCAAACTGAGTGGTGGCTTATCATCTAATGAAACGGTTGACGCTGGTGATTTAATGGAAGCTTGGGATTTGTTTGCGGACCGCGAATCTGTTAATGCGCAGTTGTTTATTGCCGGTTCTTGTGCAGGTGAATCTTTAGAAGTTGCTTCTACAGTTCAGAAACATGTTGTAGCAATTGGTGATTCTCGTCAAGATTGCTTGGTTCTTTGCTCACCACCACGTGCAACTATAGTCGGTATTCCTGTTAATCGTGCAGTTGATAATCTGGTTGATTGGCGTACTGCATCAGGATCTTACACTGATAATAACTTTAATGTAAGTTCTACTTATGCTGCTATTGACGGTAACTATAAATATCAATACGACAAATATAACGATGTGAATCGTTGGGTTCCGTTAGCTGCTGATATTGCCGGTCTTTGTGCTCGCACAGACAATATTTCTCAGCCTTGGATGTCTCCGGCCGGTTATAACCGTGGACAAATTCTTAACGTTATTAAGCTTGCAATTGAAACTCGTCAACCACAACGTGATCGTTTGTATCAGGAAGCTATTAACCCTGTTACTGGTACCGGTGGTGACGGATATGTTCTGTACGGCGATAAAACTGCCACTTCCGTTCCTTCACCATTTGACCGTATTAACGTTCGTCGTTTGTTCAATATGGTTAAAACGAACATTGGTTCAGCATCTAAATATCGCCTGTTTGAATTGAACAACGCATTTACCCGTTCTTCTTTCCGTACGGAGACTTCTCAATATCTACAGGGTATTAAAGCTCTCGGTGGTGTATATAACTTTAAAGTTGTTTGTGATACTACCAATAACACCCCAGCAGTTATCGACCGTAATGAATTTGTAGCTACTTTCTACTTACAACCTGCCCGCTCGATAAATTATATTACGTTGAACTTTGTAGCAACAGCAACTGGTGCCGATTTCGACGAACTGATTGGTGCTGTAGGTGGTTAA

Genome Context

Tertiary structure

PDB ID

677ba1d7f79ed2f3ba551a8ba226e6b4e2de5693b2c215a2a0908faf7f380b84

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7888

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence