Protein

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Genbank accession
UDY80233.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKFPLTQGAYEARSVIANAQRCLNLFPESNTDDAPFPMTHYTTPGLLLKGIAPSGDGWRCLYAANNGNLYGVAGEKVYRIKPDFTFTELGSILYSTGPVYAVDNGIYVLMVDGTLNGYTIKLNTDEFATISSSAFYGSSRVDLADDYLLLNRPGTNQWYISKFQAVEFDALDFAAKTGFSDNVVAVAAAKRQVFVFGELTTEVWFNEGNTDFTFSRMPGAFIQHGCAAVGSIQQMDGSLYWLSRSPQGHCVFVRSVNYEAARISTHAIEQEISKYARIDDAIAYTYQQEGHFFYVVTFPTADKTWVYDVATQLWHERAWLDEFGKEHRHRSNCHAFWQGMTLVGDWENGNLYEMRPDVYQDNGEPIRRVRSFPHMLSDSNRVMYRELIAAMQVGEGRPDSFESGELRLRWSDTGGASWGSSISSELGPRGDHIRSLQFQRLGYARDRVFELSWMANTKTALNGVFLRVEEANE
Physico‐chemical
properties
protein length:473 AA
molecular weight: 53351,01190 Da
isoelectric point:5,31788
aromaticity:0,13319
hydropathy:-0,32241

Domains

Domains [InterPro]
DC_1784
STR
2–473
DC_1784
IPR036148
Unmapped
260–369
IPR036148
UDY80233.1
1 473
Architecture
STR
STR 2-473
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UDY80233.1
1 473
Domain Start End Length (AA) Confidence
N-terminal 1 426 426 0,6930
Central domain 427 462 37 0,0018
C-terminal 463 473 10 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-426
Central
427-462
C-terminal
463-473

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PAE2
[NCBI] 		2884453 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UDY80233.1 [NCBI]
Genbank nucleotide accession
OK041467 [NCBI]
CDS location
range 6746 -> 8167
strand +
CDS
GTGAAGTTCCCTCTTACCCAGGGCGCCTACGAGGCGCGCAGCGTCATTGCTAACGCACAGCGCTGCCTGAACCTATTCCCCGAGTCGAATACTGACGATGCGCCGTTCCCGATGACGCATTACACGACTCCAGGGCTTCTCCTGAAAGGGATTGCGCCGAGCGGCGACGGGTGGAGATGCCTGTACGCAGCAAACAACGGGAATCTGTACGGTGTCGCCGGAGAAAAGGTCTACCGGATCAAGCCGGACTTCACCTTCACTGAGCTAGGCTCGATCCTGTACAGCACTGGCCCTGTCTATGCCGTGGACAATGGCATCTATGTGCTGATGGTTGACGGTACCCTGAATGGGTACACGATCAAGCTCAACACAGACGAGTTCGCGACTATCTCATCGTCTGCTTTCTACGGTTCGTCCAGGGTCGATCTTGCGGATGACTACCTCCTGCTCAATCGGCCAGGAACCAACCAGTGGTACATCTCGAAATTCCAGGCTGTCGAGTTCGATGCGCTTGATTTCGCCGCGAAAACTGGATTTTCGGACAACGTAGTTGCTGTAGCGGCGGCGAAACGACAGGTATTCGTCTTCGGCGAACTGACCACAGAGGTCTGGTTCAACGAAGGCAACACGGATTTCACGTTTAGCCGCATGCCTGGCGCGTTCATTCAGCACGGGTGCGCCGCTGTTGGAAGCATTCAACAAATGGACGGCTCGCTGTACTGGCTGAGCCGCAGCCCGCAAGGACATTGCGTATTCGTGCGTTCCGTTAACTACGAGGCCGCACGGATCTCCACTCATGCTATCGAGCAGGAAATCAGCAAATACGCCCGGATCGATGATGCCATTGCATACACCTATCAGCAGGAGGGGCACTTCTTCTATGTCGTGACGTTCCCGACTGCCGACAAGACGTGGGTCTACGACGTAGCAACTCAGTTATGGCATGAGCGTGCATGGCTGGACGAGTTTGGCAAAGAGCATCGCCATCGGAGTAACTGCCATGCGTTTTGGCAGGGGATGACTCTTGTAGGCGATTGGGAAAACGGCAACCTCTACGAGATGCGCCCTGACGTGTATCAGGACAACGGCGAGCCGATCCGGCGCGTTCGATCCTTCCCGCACATGTTGAGCGACTCTAACCGTGTCATGTATCGCGAACTGATCGCTGCAATGCAGGTTGGTGAGGGGCGCCCAGATAGCTTCGAGTCTGGTGAGCTTAGGTTGCGCTGGAGCGATACCGGAGGCGCCAGCTGGGGGAGTTCGATCAGTAGCGAACTTGGACCGCGCGGCGATCACATCCGATCTCTTCAGTTCCAGCGGCTCGGCTATGCCAGAGATCGAGTCTTCGAACTGTCATGGATGGCCAACACAAAGACCGCGCTGAATGGCGTCTTCCTGCGCGTTGAAGAGGCCAACGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7604f71c3204322905c0ad640301cad6f8b83037c441f76810bc3a3067577329
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and formulation of novel lytic bacteriophages for use against Pneumonia causing bacteria Ku,H. 2020-10-08 — GenBank