Protein

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Genbank accession
XPK42235.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MAIETNAVVVTDLNPLYPRDRDYIYEGAAQIRLIKQTLQNTFPNVTEPVQLDSDSLNILASKVTFTGDSMDVGGLMIKNATPGTGDSDVVTKGQMEAFMQNWMANKLYRIGSYYITEEDINPGDSSSLGFGSWAKVTGVIMGTGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRTENIPLMTVNGSSFSLSSNTHSHNMVFGRGDASGHNSSPNWYSPGGGYSQRTENDTHSHTISGSVSLGRDDISRQPINTLPPFRAAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 28924,77110 Da
isoelectric point:5,64584
aromaticity:0,07865
hydropathy:-0,39888

Domains

Domains [InterPro]
DC_0570
ATT
1–70
DC_0570 DC_0154
IPR053827
ATT
104–266
IPR053827
XPK42235.1
1 267
Architecture
ATT
STR
ATT
ATT 1-70 | STR 71-103 | ATT 104-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK42235.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,5871
Central domain 184 256 74 0,0070
C-terminal 257 267 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-256
C-terminal
257-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ManiMatter_Bas94
[NCBI] 		3398424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42235.1 [NCBI]
Genbank nucleotide accession
PQ850617 [NCBI]
CDS location
range 13342 -> 14145
strand +
CDS
TTGGCTATCGAAACTAATGCGGTAGTTGTTACCGATTTAAACCCGCTCTATCCTAGAGACAGGGATTACATCTACGAAGGGGCGGCTCAAATCCGCCTCATTAAACAAACATTACAGAACACATTCCCAAATGTTACAGAGCCAGTTCAGTTGGACTCAGATTCTCTCAATATTCTGGCTAGCAAAGTTACCTTTACTGGTGACTCTATGGATGTTGGTGGGTTGATGATCAAGAATGCCACTCCGGGTACAGGTGATAGCGATGTTGTCACTAAAGGCCAGATGGAAGCTTTCATGCAGAACTGGATGGCTAATAAACTTTACAGGATTGGCTCTTACTATATCACTGAAGAAGATATTAACCCCGGTGATAGTTCTTCTCTTGGTTTTGGCTCTTGGGCTAAAGTGACTGGTGTTATCATGGGTACTGGTGTAGTAAACCCTGATGGCTCTGTTCCTAATGCTCAGAGGGTTGAATTCCAAGCAGGTGGTACTGGTGGTCGTGTATTCAATACCATTCGTACAGAGAACATACCTTTGATGACAGTTAATGGCTCCAGCTTCTCTTTATCCAGCAACACCCACAGTCACAACATGGTATTTGGTCGTGGAGATGCTAGCGGTCATAACAGCTCACCTAATTGGTATAGTCCGGGTGGTGGTTACAGTCAGAGAACGGAGAATGATACACACTCTCATACAATCTCTGGTAGTGTGAGTCTTGGTCGTGACGATATCTCTCGTCAACCTATCAACACTTTGCCACCATTCAGAGCGGCTCACATTTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
429777146da2d930179bdfc98f0154ebb5829d16db17deb15e66c6efde4f0258
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7062
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank