Protein

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Genbank accession
AOV62211.1 [GenBank]
Protein name
hemagluttinin-like outer membrane protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MANFNKSFNFRGGFQVDETTFIVRGEKVGIGSSVPDTLLDVNGTITAKGLAIDSSADVIIESANVGFLSATTIHVGVASISAGIITSATPTGIVTYYGDARFLQGLPTSQWIDTDVGLGYTSIYAAGNVGVDTTDPRYAFQVGGVPFPTIDGPPLPAQDGVGIENGNVYASGIVSTRGEFIGLGSNITAIDGSNITVGAIGSMAYGPLIVTEEVIADRFTGIASTAISVTPDATLEFDTATANEFNAVNRFVSTTGKLQIGDDSTSSAVGDIDVFKTGSNSSVYSLSNQVSKLFVGAQRQSGQARQFGGLRHGLVGSDPLTQINDLDLVNYDIGNLNFYLHSGSGGPGITTGAFRWIYGQTGFSLAELSKEGVFSLKGNGVSGSIVLEVAGISSFSDAVYINGDLNVPAGNNVDIGADITVSGNFDFSGSTITFPDQVTMEELIISDTLTVGNPLSDFVTITSTQISNGNSIIGNGTINSTSIQGDTINGTSVNATELQYTTSLVGPQFSINSLGDLQASSITSASASLSSIISTDITTGSLSVTSSLSAINANVTTITSDTVNSTNINGTTLDISGTSTLNDISSNSIDTPLANITAVNTNSIAPLSSSSISIPGDIDGAGNGTITDFSELNSSLVNCTTLRVDQIEIAPGLFSSTSVRLTFISDSVPDGAYVDLTLTPLPSN
Physico‐chemical
properties
protein length:684 AA
molecular weight: 70136,44090 Da
isoelectric point:4,05003
aromaticity:0,06725
hydropathy:0,15833

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOV62211.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9454
Central domain 233 673 442 0,1683
C-terminal 674 684 10 0,2636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-673
C-terminal
674-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM7
[NCBI] 		1883368 Uroviricota > Caudoviricetes > Pantevenvirales > Mazuvirus > Mazuvirus scam7
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV62211.1 [NCBI]
Genbank nucleotide accession
KU686213 [NCBI]
CDS location
range 27479 -> 29533
strand +
CDS
ATGGCTAATTTTAATAAGTCCTTCAATTTTAGAGGTGGATTCCAGGTCGATGAAACAACTTTCATCGTCCGTGGAGAGAAGGTGGGCATTGGTTCCAGTGTCCCCGATACTCTCCTAGATGTAAATGGAACCATCACAGCTAAAGGACTGGCTATTGATTCTAGTGCTGATGTTATTATAGAGAGTGCGAATGTAGGCTTCTTAAGTGCTACAACTATTCACGTTGGTGTTGCTTCTATTAGTGCTGGTATTATTACATCAGCAACTCCAACTGGAATCGTCACATACTATGGCGATGCAAGATTTTTACAAGGACTACCAACTTCGCAGTGGATTGATACTGATGTTGGGTTAGGCTACACAAGTATCTACGCAGCTGGTAATGTTGGTGTAGATACAACAGATCCCCGTTATGCCTTCCAGGTTGGTGGTGTTCCTTTCCCCACCATAGATGGACCACCACTACCCGCACAGGATGGCGTAGGTATTGAGAATGGTAATGTATATGCTTCTGGTATTGTATCTACCCGTGGTGAGTTTATTGGTTTAGGTAGTAATATCACTGCTATTGATGGTAGTAATATTACTGTTGGTGCTATTGGTTCTATGGCTTATGGTCCTCTAATTGTAACAGAGGAAGTCATTGCTGATAGGTTCACTGGTATTGCTTCTACAGCTATTAGTGTAACTCCTGATGCTACACTAGAGTTTGATACTGCAACAGCTAATGAGTTTAACGCAGTAAATAGATTCGTATCTACCACAGGTAAGCTACAGATAGGTGATGACTCAACATCTTCCGCTGTAGGTGATATTGATGTATTTAAGACTGGTTCTAATTCATCAGTATATTCACTATCAAATCAAGTATCCAAGCTATTTGTAGGGGCACAAAGACAATCTGGTCAGGCTAGGCAGTTCGGTGGACTACGACACGGATTAGTTGGTAGCGACCCACTCACTCAAATTAATGACCTTGACCTAGTAAACTATGATATTGGTAATCTAAACTTTTATCTACACTCTGGTAGTGGTGGTCCAGGTATTACTACTGGTGCTTTCCGCTGGATATATGGTCAGACTGGCTTCTCTCTAGCAGAACTATCCAAAGAAGGTGTATTTTCACTGAAAGGTAATGGTGTTTCTGGTTCTATTGTATTGGAAGTTGCTGGTATCTCTAGTTTTTCTGACGCAGTATATATTAACGGAGACTTAAACGTTCCCGCAGGGAATAATGTTGATATTGGTGCTGATATAACTGTTAGTGGTAATTTTGACTTTAGTGGTAGTACTATAACCTTCCCAGATCAAGTTACAATGGAAGAATTGATAATAAGTGATACTCTCACAGTTGGTAATCCATTATCAGATTTTGTAACTATTACATCAACGCAAATATCTAATGGAAATAGTATTATTGGTAATGGCACTATCAACTCTACTTCAATTCAGGGTGATACAATTAATGGTACATCTGTAAATGCAACAGAATTACAATATACCACATCTTTAGTTGGTCCTCAATTCTCAATAAATTCTCTGGGTGATCTACAGGCATCTTCAATAACATCTGCATCTGCATCATTATCATCAATTATATCCACAGATATTACTACTGGCAGTCTTTCTGTTACTAGCTCTTTATCTGCAATTAATGCAAATGTAACTACAATTACTTCGGATACGGTTAATTCCACTAATATTAATGGAACAACATTGGATATTTCGGGAACCAGTACATTAAATGATATATCTTCCAATTCTATAGATACCCCTTTAGCAAATATAACTGCGGTTAATACTAATAGTATTGCTCCACTTAGTTCATCATCTATCTCTATACCTGGAGATATTGATGGCGCTGGAAATGGAACTATCACAGATTTTAGTGAATTGAATTCTAGTTTAGTTAATTGTACAACACTTAGAGTTGATCAAATTGAGATCGCTCCAGGATTGTTTAGTTCAACTAGCGTTAGATTGACCTTCATTAGTGATTCAGTTCCCGACGGTGCTTATGTTGATCTTACATTGACCCCACTTCCATCTAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4ebd153d1fbe45366b8d8e166ee61b168c610b0eae75100ec9c56e587a09a7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4940
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50