Protein

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Genbank accession
GENB_12c7594f4474 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MERFMAEFGQDYVQIPVLSENNAVSYKLSIAGSCTKSTKKAYIKFQDEDFGPQNFQSGLNLVEIDPTNNTIVATKSYAFTKDHDVISQAFITYISSIPAGRIVCFISSGKLNASQVLIDWFRAAGSAAFPDKWLIDKVDTSYSAFYVSGRNAIVMEHVLYNDGVLVEDVSTPLEVVYDNFNDVGGTGFPVRIVEDENTYYSGATQEIKRFPTEATITPCADYNMVPGDFFYLKFQMTYDQALKDLGTTQMSIRFFNGQEMLQSTDINIPVGAGSPPAGAWMSFERVVEVPLNANGFTLYARKTVLDGQGGVRNVVFGEIARPEDTPKSAEIGVNGIRMNFGTETRSMDNVIAQLNDKSSGNAGKVFVQEFKEKY
Physico‐chemical
properties
protein length:374 AA
molecular weight: 41376,06990 Da
isoelectric point:4,74710
aromaticity:0,11765
hydropathy:-0,18770

Domains

Domains [InterPro]
DC_0912
STR
1–374
DC_0912
PS52031
LEC
22–192
PS52031
IPR039477
STR
57–128
IPR039477
GENB_12c7594f4474
1 374
Architecture
STR
STR 1-374
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_12c7594f4474
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,6364
Central domain 173 363 192 0,6007
C-terminal 364 374 10 0,3811
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-363
C-terminal
364-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Dhakavirus CLBP2
[NCBI] 		3108099 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OZ035781.1_CDS_[61987..63111] [NCBI]
Genbank nucleotide accession
OZ035781.1 [NCBI]
CDS location
range 61987 -> 63111
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
d23a3bd999e6c1e49c119c68252939a4deac291fa5099d8dd4c6444d09d6ab15

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7079
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50