Protein

View in Explore
Genbank accession
YP_950473.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLTMGPNTGLLINGAPGEGHYSELIRMLRWDDFLRQPVVKGRVATLPTSGQAEGDTYIFTGAGANQNRLARWWATGASTPIWEYMPPRLGWRVQVANETTPAGQVKTYEYSGSAWTELVGGMADAPSDGKRYARLNNAWAGLGTAAVADILGPVSQAGGVPTGAIYEGGSNANGSYVRLADGTQICSSSLLTFTAGSTSVGASWTFPASFVSPSLMFGTVVASGAGADYDPGVAARNLGAVYFNASTNSAALGFLCISSASFTAGAQTRNNRAVAIGRWF
Physico‐chemical
properties
protein length:281 AA
molecular weight: 29228,32400 Da
isoelectric point:7,74132
aromaticity:0,10320
hydropathy:-0,01708

Domains

Domains [InterPro]
DC_0857
STR
21–281
DC_0857
G3DSA:1.20.5.320
STR
98–147
G3DSA:1.20.5.320
YP_950473.1
1 281
Architecture
STR
STR 21-281
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage DMS3
[NCBI] 		2913973 Uroviricota > Caudoviricetes > Casadabanvirus >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_950473.1 [NCBI]
Genbank nucleotide accession
NC_008717.1 [NCBI]
CDS location
range 34668 -> 35513
strand +
CDS
ATGAGCCTGACAATGGGGCCGAACACTGGCTTACTGATCAACGGCGCCCCCGGTGAGGGGCATTACAGCGAACTGATCCGCATGTTGCGCTGGGATGACTTCCTGCGCCAACCGGTCGTAAAGGGGCGGGTCGCAACGCTGCCGACTTCCGGCCAGGCCGAGGGCGACACTTACATTTTCACCGGGGCCGGGGCGAACCAGAACCGCTTGGCCCGCTGGTGGGCGACTGGTGCGTCAACGCCAATCTGGGAGTACATGCCGCCACGGCTGGGCTGGCGTGTCCAGGTCGCAAACGAGACAACCCCGGCAGGCCAGGTCAAGACCTACGAGTATTCCGGCAGCGCCTGGACTGAGCTGGTGGGCGGAATGGCCGACGCGCCGAGCGACGGGAAGCGCTATGCCCGACTAAACAACGCGTGGGCAGGCTTGGGGACTGCTGCCGTCGCCGATATTCTTGGGCCGGTCTCTCAGGCTGGCGGTGTGCCAACTGGTGCGATCTACGAGGGCGGCAGTAACGCGAACGGAAGTTACGTCAGGCTCGCAGACGGAACGCAAATTTGCTCCAGCAGCCTTTTAACGTTTACTGCGGGTTCAACGTCGGTGGGTGCGTCTTGGACGTTTCCGGCCAGCTTTGTGTCGCCGTCGCTGATGTTTGGCACCGTTGTAGCATCGGGAGCCGGCGCAGACTATGACCCCGGCGTCGCTGCGAGGAACCTGGGAGCTGTTTACTTCAATGCGTCAACAAACTCTGCTGCACTGGGGTTTCTTTGCATCTCGTCTGCATCGTTCACCGCTGGCGCCCAAACTCGAAATAACCGTGCTGTCGCAATTGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
86dfe0611c9ca4bcaf16610d9820eb7a3035f2afdc220efb4c4e3ab866bd879a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7602
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa Zegans,M.E., Wagner,J.C., Cady,K.C., Murphy,D.M., Hammond,J.H. and O'Toole,G.A. 2009 18952788 GenBank
Complete genomic sequence and annotation of Pseudomonas aeruginosa phage DMS3 Wagner,J.C., Zegans,M.E., Murphy,D.M. and O'Toole,G.A. Jr. 2009-01 — GenBank