Protein

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Genbank accession
YP_010749624.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLYFPRSLKPVVSKGYSMTRRNNVWSVDLAGGGVRQGRDTYYDVFPISVTLITSAMGRQAFLSFLEKVDGGASSFWMAHDFGMGIEDYQVTITSTVAESTEDGINWTITFTATAEKSPFQDLENQCLINNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSNEGPAGYPPINLLASTLDSRIVYGAPQVYYINRNGNLVQSAANEWPLTFIDGVAVGRVPPESASSNILIKSSKLSDASWDKTRTTVSDAVDGFLNGGTFSLVPNQTNTSHLVYQSVSSAFAEGDVYTLSYVAKAYGYNYARLRAADDAGFIADCVANLSTGVIYAGAPGSDIAELGDGWYRFTETVAIRQGGASSLLLASWVYNNSAVGSFVGDGVSGILVCAMQIEKSPFATSPIVTESSPVTRTTASAKVVMNGATSIDITYSDGSVVNVPSVDGYAAIPQADSAWGSKYITRIDFNVDS
Physico‐chemical
properties
protein length:465 AA
molecular weight: 49926,08130 Da
isoelectric point:4,54368
aromaticity:0,11398
hydropathy:-0,01269

Domains

Domains [InterPro]
DC_0353
STR
48–465
DC_0353
NF048003
Unmapped
224–409
NF048003
YP_010749624.1
1 465
Architecture
STR
STR 48-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-22664BS2
[NCBI] 		2865787 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010749624.1 [NCBI]
Genbank nucleotide accession
NC_073324.1 [NCBI]
CDS location
range 22068 -> 23465
strand +
CDS
ATGAGCGACTTATATTTCCCACGTAGCCTTAAGCCGGTGGTATCGAAAGGCTACTCAATGACCAGACGCAACAACGTCTGGAGTGTAGATTTAGCCGGTGGCGGAGTGCGTCAAGGCCGTGACACGTATTATGATGTGTTCCCAATAAGCGTAACCCTGATTACATCCGCAATGGGGCGGCAGGCGTTTCTGTCGTTCCTCGAGAAAGTCGATGGTGGCGCGTCAAGTTTCTGGATGGCGCACGACTTCGGCATGGGTATTGAGGATTATCAAGTCACCATTACATCCACCGTCGCCGAGTCCACTGAAGACGGGATTAACTGGACAATTACTTTCACGGCAACCGCTGAGAAATCACCGTTCCAGGACCTCGAGAACCAGTGTCTGATTAACAATCTGCCAGATTTGTATGGCTGTTATGGTGATTGCCTGGGCAGTTTCCTGAAAATATACGCGAACTATGAGACAACGTTCCCGCGCATCTGGAGCAATGAAGGGCCTGCCGGGTATCCACCGATTAACCTTCTGGCGTCGACTCTTGATAGCCGCATTGTGTATGGCGCGCCGCAGGTTTATTACATCAACCGCAACGGCAATCTTGTGCAGTCCGCCGCTAATGAATGGCCTCTTACGTTTATTGATGGGGTTGCTGTTGGACGTGTTCCGCCGGAATCCGCGTCCAGTAATATCCTGATTAAATCGTCGAAATTATCTGACGCATCGTGGGATAAAACTAGAACAACAGTGTCGGATGCAGTTGACGGATTTCTAAACGGTGGTACGTTCTCGCTAGTCCCGAACCAGACAAACACCAGCCATCTCGTATATCAATCGGTGTCTTCCGCTTTTGCGGAGGGTGATGTATACACTCTCAGTTACGTTGCTAAGGCATATGGTTATAATTATGCGAGACTTCGCGCCGCTGATGATGCTGGGTTTATCGCGGATTGTGTTGCTAACTTATCGACAGGGGTTATTTACGCGGGCGCCCCCGGCAGCGATATAGCAGAGCTTGGCGATGGTTGGTATCGATTTACAGAAACGGTAGCTATACGCCAGGGCGGCGCATCTTCTCTGCTTTTAGCGTCATGGGTGTACAACAACTCCGCCGTTGGTTCATTTGTCGGTGACGGGGTTAGTGGGATATTAGTGTGCGCGATGCAAATAGAAAAATCACCTTTTGCCACGTCGCCAATAGTAACCGAATCGTCACCGGTAACCCGAACGACGGCATCGGCAAAAGTAGTAATGAACGGTGCAACAAGCATTGATATTACATATTCAGACGGCTCTGTGGTAAACGTTCCGTCTGTTGACGGTTACGCCGCCATCCCTCAAGCAGACTCTGCGTGGGGAAGCAAGTACATCACCCGTATTGATTTTAATGTGGACAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6760d014cf4593241e7a794df1e1847eb7ba0340cdeb22d93ae70000154b59d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8248
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank