Protein

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Genbank accession
XYS96012.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLNNLNQPKGSTIGVLRDGRTVQAAIDELHGSLTIADLRHMAFTEVGQEVVIGEHTAGQGMGGGTFRVISLTPGSYVDDNGCQIITNSGVVLRRKTHFISSDMFGLQGGGDIIACLNNMYKASRTLRIEEVLICRQTNGQTYRADTRTTPGFSGDVTDGLGFYIKGLGVGNRGPRIDHVGGGVLFKIFKDRNVSSDFWVTCGISRLVIQGRSDAWTGSNTTVDATPIRIQDVIGAEISDIFIQGYLGNTSGAAFSLYNVTGWTELARFDNVMVRNSAVILRLHRDPNGNGGTDSFFGLKGNIEANAGATGPTTFLRLGDGTYEGRCFLYGHDLKITGWMSSSAGHVGVRVTDYSTCTEGLFTFVFDGYGISAGATAPVISLIRTDGLNSRFDCDVRNYSGQSGRASLSILQHIWNSCVHSSPEAINNSLNNAYPCVRPRGMRLSFKGTFTLEETQNGATFPLGNLIPGMKLRVTLHSWNTDKYQLKVSKWDVQVMSIDFPCVITPAFSKGPTLTPTTATVTTPTGTTQALTDVSISHPERVQSDSLGSLSLRLNNGRPNNGTGYLANSGLKLYVELPPDAGASVGKAYSVEIEIL
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63934,31360 Da
isoelectric point:7,16895
aromaticity:0,08067
hydropathy:-0,12840

Domains

Domains [InterPro]
DC_1550
ATT
1–35
DC_1550 IPR059934 DC_0250
IPR059934
RBD
34–94
IPR059934
XYS96012.1
1 595
Architecture
ATT
RBD
STR
ATT 1-35 | RBD 36-93 | STR 94-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS96012.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,9920
Central domain 113 399 288 0,9871
C-terminal 400 595 195 0,9468
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-399
C-terminal
400-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage HMGUkp4
[NCBI] 		3434164 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96012.1 [NCBI]
Genbank nucleotide accession
PV683291.1 [NCBI]
CDS location
range 19731 -> 21518
strand -
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTGTTCAAGCGGCAATTGACGAGCTACACGGCTCACTGACGATTGCTGACCTTCGGCACATGGCGTTCACCGAAGTAGGTCAAGAGGTTGTAATCGGCGAGCACACGGCGGGTCAAGGCATGGGAGGAGGAACCTTCCGTGTCATCTCGCTTACTCCGGGTTCCTATGTGGATGACAATGGGTGCCAGATTATCACCAATAGCGGCGTAGTGTTGCGGCGAAAGACTCACTTCATCTCGTCCGATATGTTTGGACTTCAGGGCGGCGGTGACATCATCGCTTGCTTGAACAACATGTATAAGGCGAGTCGGACGTTGCGCATTGAAGAGGTGCTAATATGTCGCCAGACTAACGGACAGACGTACCGCGCGGACACTCGAACCACTCCTGGATTTTCCGGGGATGTAACCGATGGCTTAGGGTTCTACATAAAGGGTCTGGGTGTTGGTAACAGGGGGCCGCGTATCGACCATGTCGGAGGTGGTGTACTCTTTAAGATTTTCAAGGACCGAAACGTGTCGTCGGACTTCTGGGTAACCTGCGGCATCTCGCGCCTCGTTATCCAAGGGCGTTCGGACGCGTGGACCGGGAGCAACACTACGGTGGACGCAACCCCTATCCGTATTCAGGATGTTATCGGTGCGGAAATCAGCGACATCTTCATTCAGGGATACCTTGGTAATACCTCAGGTGCGGCTTTCTCCCTGTACAACGTAACTGGGTGGACCGAGCTGGCACGCTTCGATAACGTAATGGTGAGAAACTCCGCAGTAATCCTCCGACTACACAGGGACCCTAACGGTAATGGTGGCACAGATTCATTCTTCGGTCTCAAAGGAAACATTGAGGCTAACGCTGGAGCGACTGGTCCCACCACGTTCTTGCGATTGGGTGACGGCACCTATGAGGGCAGATGCTTCCTGTACGGACATGACCTCAAGATTACTGGGTGGATGTCCTCAAGTGCAGGTCACGTTGGGGTCCGCGTCACCGACTACAGTACCTGTACTGAGGGACTATTCACGTTTGTGTTCGACGGGTACGGTATATCGGCTGGCGCAACGGCTCCGGTAATCAGCCTGATACGCACAGACGGTCTAAACAGCCGCTTCGACTGCGATGTCCGTAACTACTCAGGACAGTCTGGACGCGCCTCGTTGTCTATCCTACAGCACATCTGGAACTCGTGTGTCCACTCCTCCCCGGAAGCTATTAACAACTCGTTGAACAATGCGTACCCTTGCGTGCGTCCACGAGGTATGCGCCTATCGTTCAAGGGCACTTTTACCTTAGAGGAAACACAGAACGGCGCGACGTTCCCGCTTGGTAACCTTATTCCGGGTATGAAACTGAGGGTGACCCTCCACTCATGGAACACCGACAAGTATCAACTTAAAGTGTCGAAGTGGGACGTACAGGTGATGTCCATCGACTTCCCTTGCGTAATAACGCCAGCGTTCTCTAAGGGTCCGACACTTACACCCACAACGGCAACCGTGACGACTCCAACAGGGACCACTCAGGCACTCACCGACGTGTCAATCAGCCATCCTGAGCGAGTACAGAGCGATTCGTTAGGTTCTCTGTCTCTGCGGCTGAACAACGGTAGGCCCAACAACGGGACAGGTTATTTAGCGAACAGTGGTCTGAAGTTGTACGTGGAGCTGCCGCCAGACGCCGGAGCGTCCGTTGGTAAAGCGTACTCAGTGGAGATTGAAATCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
502c8046c256d55ef28a32a756c5d1f16bd6559c1a323e58729f225cdb52c8bd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8439
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50