Protein

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Genbank accession
AGH26969.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSNDKAQTILLKELGYTATLNRRVETVNSLIASGTSTKAVVFQDKFFTGFSGTSVAAGAALPTIGIVIENAQSGDFFSLSSISSTGFSIDIKNGSSFVDRNFKYTAVGFGRGS
Physico‐chemical
properties
protein length:114 AA
molecular weight: 11948,23330 Da
isoelectric point:9,15556
aromaticity:0,10526
hydropathy:0,11316

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage MED4-184
[NCBI] 		889955 No lineage information
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH26969.1 [NCBI]
Genbank nucleotide accession
JF974286.1 [NCBI]
CDS location
range 211 -> 555
strand +
CDS
ATGTCTTCTAATGACAAAGCACAAACAATTCTTCTAAAAGAACTTGGTTATACTGCTACACTTAACAGAAGAGTTGAAACTGTAAATTCTCTAATTGCCTCTGGTACTTCAACCAAAGCAGTAGTTTTTCAAGATAAGTTTTTTACGGGCTTCAGCGGTACAAGTGTAGCTGCTGGTGCAGCTTTACCTACTATTGGAATAGTAATAGAAAACGCACAGTCAGGTGATTTCTTTTCTTTGTCTTCTATTAGTTCAACTGGATTTTCAATAGATATAAAAAATGGATCTAGTTTTGTTGATAGGAATTTTAAATATACTGCTGTTGGTTTTGGTCGTGGCTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81372d57d38b4fa915313b3b893ce0f8f65121e69e8f564f038ba0b85c7ce521
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6934
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage MED4-184 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank