Protein

View in Explore
Genbank accession
WVH05476.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTFTLDGAKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFSTATTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNLRQQKQWAGSALNQANAAAASAQQAATNNQQSLVNNQQSYQNLVAAQQQATNSQTSANNSANSASASQTSRLASETARDLSQAWASKAEDQVVSGGLYSSYHYSRKSAASAAASQTSATNSAGSASFATTEANRATTQADRAKTEADKLGNMNLLGGALDSVSGNTVTWKGRQISKTGGFQANLGDDAEANFSLCAADGSDPIRLVRVASRDVHLYGNASGDGCRMSWSSSGVTIPKALTVNGQTVLKSTSVASLTSDGLVMSKGGMVQVQAVSASANAHVWFYAPDGSSRGILYCQQTGQMTVQAGSSVAANFFPDGHSAFNQINTNSIENQGRVASYRSGIGVNASMYANCHYMAQTDDGSPPAYGFHRGGSYALAMYLSGTGLFLMDSGGTNREVLTNANLMAWIAGSMTADVIGSIATMYNQSGTNLGLNSVLAGGSLRFASHNNVSGQAGSGSWRSTSNANNGGVSTWVRYA
Physico‐chemical
properties
protein length:627 AA
molecular weight: 65864,68290 Da
isoelectric point:7,08824
aromaticity:0,07018
hydropathy:-0,29330

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–627
DC_0657
WVH05476.1
1 627
Architecture
ATT
STR
ATT 1-131 | STR 132-627
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVH05476.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,9858
Central domain 203 401 200 0,4385
C-terminal 402 627 225 0,9444
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-401
C-terminal
402-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Athelas
[NCBI] 		3111806 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVH05476.1 [NCBI]
Genbank nucleotide accession
OR997970.1 [NCBI]
CDS location
range 37625 -> 39508
strand +
CDS
ATGGCCACTACACCGAAAACGGTGCGGACATTCACCCTTGATGGTGCCAAGAAGGACTTCACGATTCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTCGTGACTTTGATTGGTGCCACTCGACGTGAGCTGATCCTCAATACCGAATACCGCTTCTCGACCGCTACCACTATCACGACCAACAAGGCGTGGGGGCCAGCGGACAACTTTGACCTGATCGAGATTCGTCGTCTGACCAGCGCCACTGAGCGACTCGTTGACTTCGCCGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTGCAATCGCTGCACATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTCGATGCCCGTGCCCGCAAGATCGTTAACCTCGCTGATGGCGTGAACGACGGTGACGCTGTGAACCTGCGCCAGCAGAAACAATGGGCAGGCTCTGCGTTGAACCAAGCGAACGCCGCTGCTGCTTCTGCTCAACAGGCTGCAACGAACAACCAGCAGTCTCTGGTCAACAACCAGCAGTCCTATCAGAACCTCGTTGCGGCCCAGCAACAGGCCACCAACAGTCAGACCTCTGCGAACAACTCTGCGAACTCCGCAAGTGCCTCTCAGACCTCCCGTCTGGCCTCGGAGACTGCCCGTGACTTGTCCCAAGCGTGGGCCTCGAAGGCTGAAGATCAGGTCGTCTCTGGGGGCCTCTATTCGAGCTACCACTACAGCCGTAAATCTGCTGCGAGTGCTGCTGCGAGTCAGACCTCTGCGACCAACTCTGCTGGCTCTGCGAGCTTCGCTACGACTGAAGCCAACCGGGCAACCACTCAGGCTGACCGTGCGAAGACCGAGGCCGACAAGCTGGGCAACATGAACCTGCTCGGTGGTGCTTTGGATTCCGTGAGCGGAAACACTGTGACTTGGAAAGGTCGTCAGATCAGCAAGACTGGTGGTTTCCAAGCGAACCTCGGAGATGACGCTGAGGCGAACTTCTCGTTGTGTGCTGCTGACGGTAGTGACCCAATTCGTCTCGTCCGTGTAGCGTCCCGTGATGTCCACCTCTACGGCAACGCCAGCGGCGATGGCTGCAGGATGTCTTGGAGTTCCTCTGGCGTAACTATCCCGAAGGCCCTGACTGTTAATGGACAGACAGTGCTGAAATCAACCTCGGTGGCAAGTCTGACCTCTGATGGGTTAGTAATGTCGAAAGGTGGGATGGTTCAGGTTCAGGCAGTCAGCGCTTCAGCCAACGCACACGTCTGGTTCTATGCACCCGATGGGTCGAGCCGTGGCATCCTCTATTGCCAACAGACCGGTCAAATGACGGTTCAAGCTGGCAGTTCTGTCGCTGCAAACTTCTTCCCTGATGGCCACTCTGCATTCAATCAGATCAACACGAACAGCATTGAGAACCAAGGCCGGGTCGCTTCGTACCGTAGCGGTATCGGCGTGAACGCCAGCATGTACGCTAACTGCCACTACATGGCCCAGACAGACGACGGCTCGCCTCCTGCCTACGGGTTCCACCGTGGCGGCTCCTACGCTCTCGCAATGTACCTGAGCGGCACCGGATTGTTCCTGATGGACTCTGGTGGAACCAACCGCGAGGTTCTCACTAACGCCAACCTCATGGCGTGGATTGCAGGGAGCATGACCGCTGACGTTATCGGCTCCATTGCGACCATGTACAACCAATCTGGCACCAACCTCGGCCTGAACAGTGTCCTCGCTGGCGGCAGCCTTCGGTTCGCGTCTCACAACAACGTGAGCGGGCAGGCAGGTTCTGGATCGTGGCGCAGTACCTCTAACGCGAACAACGGTGGCGTGTCTACTTGGGTTCGCTACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ae14d1b13c26511f76a74b47be21c5692211fe82cd8540445a96551c081352f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Seed coating with phages for sustainable plant biocontrol of plant pathogens (of the genera of Pseudomonas, Xanthomonas and Agrobacterium) and influence of the seed coat mucilage Erdrich,S.H., Schurr,U., Frunzke,J. and Arsova,B. 2024-06 — GenBank