Protein

View in Explore
Genbank accession
YP_009198669.1 [GenBank]
Protein name
RBP2 (tail spike protein)
RBP type
TSP
Evidence DepoCatalog
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPRFNQPKGSTIGVLRDGRTIQEAFDSMPRLESFEGSTPTDKLRAAITLGVSEVAIGPVEGNDGSPYEFGEVVIPYPLRIVGCGSQGINVTKGTVLKRSAGASFMFHFSGEGQSQRPMGGGLFNINLNGDSATALGDIIKVTQWSCFKAQNCSFQNMAGWGIRLKDVMESTITGNLFRRLGGPSGGGILFDDIRSAVTDNVNNLHIEDNTFALISGPWIGSTANSNPDLIWICRNKFEYDGTPAVPNENPSYVLDFAQLSRAFISENGFTHFTTARNNYAGVLRIGSTALGTVLFEDNLLFACESAGVINGGIVESRGNINNQGSASAAITQFTNNSSKVCKLQRVVNIQSNGNVSVGPQLFPAGYINMAELPGNTRLSSEYDADGETTSVLRVPANTQVRQWAVPKMYQDGLTVAKVTVRANGASSGAIISLQSGSTVLSTKPIDAGVWKNYVFYVKANQLPETLQLRNTGTVDALVDGMVFEKVNYIDWDFAVTPGTLAVGAKYTSPNQSYLDVAGMRVQAVSTPMFDGPTTGLQVWVEATSGNGSFTVVMKNDTAAELVTTVTRCRVRAFVS
Physico‐chemical
properties
protein length:575 AA
molecular weight: 61547,60450 Da
isoelectric point:5,65113
aromaticity:0,08522
hydropathy:-0,09270

Domains

Domains [InterPro]
DC_1231
ATT
1–153
DC_1231 DC_0629
IPR011050
STR
39–341
IPR011050
IPR012334
STR
63–441
IPR012334
YP_009198669.1
1 575
Architecture
ATT
STR
ATT 1-153 | STR 154-575
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009198669.1
1 575
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,9626
Central domain 39 359 322 0,9920
C-terminal 360 575 215 0,9929
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-359
C-terminal
360-575

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage K5
[NCBI] 		1647374 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009198669.1 [NCBI]
Genbank nucleotide accession
NC_028800.1 [NCBI]
CDS location
range 35826 -> 37553
strand +
CDS
ATGCCACGTTTCAATCAGCCGAAAGGTTCAACCATTGGTGTGCTCAGGGATGGGCGCACTATCCAAGAGGCATTCGACTCTATGCCCCGCCTTGAGTCATTTGAAGGGAGCACACCCACTGACAAACTCCGGGCGGCAATTACCCTAGGTGTATCTGAGGTAGCCATTGGTCCAGTAGAAGGAAATGATGGTAGTCCTTATGAGTTCGGTGAGGTGGTGATTCCGTACCCTCTGCGTATCGTAGGGTGCGGCTCTCAGGGAATCAACGTTACTAAGGGCACCGTGCTCAAACGCTCCGCTGGTGCATCCTTTATGTTTCACTTCAGTGGCGAAGGTCAGTCACAGCGTCCTATGGGCGGAGGCTTGTTCAATATCAACTTGAACGGCGACTCAGCGACGGCACTCGGTGACATCATTAAGGTTACCCAGTGGTCATGCTTTAAGGCTCAGAACTGTTCCTTCCAGAATATGGCTGGCTGGGGCATCCGCCTGAAAGACGTAATGGAGTCAACAATAACTGGCAACTTGTTCCGACGCTTGGGCGGACCGTCTGGTGGTGGTATACTGTTCGACGATATCCGGTCGGCGGTGACAGACAACGTTAACAACCTCCACATTGAAGACAATACGTTCGCGCTTATCTCTGGACCATGGATTGGATCAACAGCCAACTCGAACCCCGACCTTATCTGGATTTGTCGCAACAAGTTCGAGTATGATGGTACGCCAGCTGTCCCTAACGAAAACCCATCTTACGTGCTGGACTTTGCGCAGCTGAGCAGGGCGTTTATCTCTGAGAACGGGTTCACCCACTTCACTACAGCACGTAACAATTATGCTGGCGTGTTGAGGATCGGTTCGACAGCGTTAGGCACTGTGCTGTTCGAAGATAACCTCCTGTTCGCTTGTGAGTCGGCTGGTGTGATTAATGGTGGTATCGTCGAGAGCCGTGGTAACATCAACAACCAAGGGTCTGCCAGCGCGGCTATCACCCAGTTCACCAATAACTCCAGCAAGGTCTGTAAGCTACAGCGTGTGGTTAACATCCAGTCTAACGGTAACGTCTCTGTGGGACCCCAGCTGTTCCCTGCTGGTTACATCAACATGGCAGAACTTCCGGGTAACACTCGGTTATCTTCCGAGTACGACGCTGATGGTGAAACAACATCGGTACTCCGTGTTCCAGCAAACACTCAGGTTCGACAATGGGCTGTCCCCAAGATGTATCAGGATGGACTGACGGTTGCCAAGGTCACTGTACGGGCAAATGGTGCATCGTCTGGTGCTATCATCTCGTTGCAGAGCGGCTCAACCGTATTATCCACCAAGCCTATTGATGCTGGGGTGTGGAAGAACTACGTGTTCTACGTGAAAGCTAACCAACTGCCAGAAACGTTGCAGCTTCGTAATACAGGTACTGTTGATGCCCTCGTGGACGGTATGGTGTTCGAAAAGGTTAACTATATTGACTGGGACTTCGCGGTGACTCCGGGTACGCTGGCCGTCGGCGCTAAGTACACATCCCCCAACCAATCGTATCTAGACGTTGCCGGGATGCGCGTTCAAGCTGTTAGCACACCAATGTTTGACGGCCCAACAACTGGGTTACAGGTCTGGGTTGAGGCAACCAGCGGCAACGGTTCGTTTACCGTGGTCATGAAGAACGACACAGCGGCTGAGCTGGTGACCACAGTAACACGATGCCGAGTAAGAGCATTCGTCTCATAA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity — https://doi.org/10.1101/2025.09.09.675204 bioRxiv