Protein

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Genbank accession
YP_009030299.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MADLKAGTTVGGALLWNASNLKLTPVSGAAPKLYYEQTNRIYTTGDKPTPEEIDTVSASRGGTYQKPVIFTEGIKLPKQASGDMPSIIPGNGDRASYETANMDISPWWGLGLRNDSAAGIKGRTIVFDVRTGSMISKGTLQADNGFIDGSSIVWSNAHKPSNVEMNAVQRTGGDSMDGTYNLSGTLIFAAGNGSGLRGRMNYNTGQHINLVSIGSDDVVSIGQNHTQVKGMTLSLPAGLSPQVRWSSDPKDMFRIYHEGFKPDNVVVGLSEVINALQLKKSGDVARTSDFEFRNLKLAADPTNDEHAVRLSYLNNNAFVQRDGVSLLSDSDWNDTKYHKPGSYNVQGGTGPNSVYAVLTAAKHPLASYCQWGVLTVSWVSGTNASSTTRMIQEFKSILRGVSAWRSCERGTSWTSWNFQWDNAENNNLYLSKTGGDSTSGSINLSNSSSWYKQSGIGVICLRPSVGTSQNVIVLGDGNIGNIEFRPATANGLIVNSRDSGNNTWRVYHQGFKPDNVDVGLGKVLNVEQVPLVSTKARGSTVNVAWVKMAEVRHTASGNSFFQFMSYGNAGVGATIRSIDTVELSGRFPNLSESTVTITAANIKNQMRHLKSTFEPNNGIARYGCVNKPGLIELWMKVPAWYSSETKYSVVSSALSTSFIEDADYVTSEPAGIVYVPIDYQYSTDNKPGKADVGLDKVENYKALPIDGSQPLNGTLDITNAARSLYYQSKGFSGLTPTTSGSTVVQWRGSYLNWNQDGQGSTDIINHPGAASGGFKFWQGTANSSAPYKQIASISPTGMFNGLSFMATVDSMVDLDQLDIPTNQNVWDDGIQIMQGAGTANNVPRGGPYPGNTGSALGTGLKFKSSANRHGQIWLEPDSTMWFRTLRSSDQGGTSGWIANLSNRNFKNYLDPEYISAGAVIDFGVV
Physico‐chemical
properties
protein length:925 AA
molecular weight: 99663,77280 Da
isoelectric point:6,87953
aromaticity:0,09081
hydropathy:-0,35838

Domains

Domains [InterPro]
DC_0466
STR
1–620
DC_0466
IPR005601
STR
61–142
IPR005601
YP_009030299.1
1 925
Architecture
STR
STR 1-620 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009030299.1
1 925
Domain Start End Length (AA) Confidence
N-terminal 1 62 62 0,8390
Central domain 63 278 217 0,2771
C-terminal 279 925 646 0,8747
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-62
Central
63-278
C-terminal
279-925

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage PS2
[NCBI] 		1481112 Uroviricota > Caudoviricetes > Muldoonvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009030299.1 [NCBI]
Genbank nucleotide accession
NC_024121 [NCBI]
CDS location
range 152136 -> 154913
strand +
CDS
ATGGCCGATTTAAAAGCAGGTACAACGGTTGGAGGAGCGTTGCTCTGGAACGCCTCTAATCTGAAATTGACTCCTGTTTCTGGTGCAGCTCCGAAGCTGTATTACGAACAAACCAACAGGATTTACACTACTGGCGACAAGCCAACTCCAGAGGAAATTGATACCGTATCGGCCTCCAGAGGTGGTACGTATCAGAAGCCAGTGATTTTCACTGAAGGTATTAAACTCCCTAAGCAAGCTTCTGGCGATATGCCTTCCATTATTCCTGGTAATGGTGACAGAGCTAGTTATGAAACTGCTAACATGGATATTTCTCCATGGTGGGGTTTAGGACTGAGAAATGATTCTGCTGCTGGTATAAAAGGACGCACGATTGTATTTGATGTCCGAACCGGTTCTATGATTTCGAAAGGAACATTACAAGCTGATAATGGTTTCATTGATGGTTCTAGCATAGTGTGGTCGAATGCTCATAAACCAAGTAACGTTGAGATGAACGCTGTTCAACGTACTGGTGGTGATAGCATGGATGGCACTTATAACCTTTCAGGAACATTGATTTTTGCTGCTGGTAACGGTTCAGGTCTACGTGGCCGAATGAACTACAACACTGGACAACACATCAATTTGGTTTCAATCGGCTCAGATGATGTCGTTTCCATAGGTCAGAACCACACCCAAGTTAAGGGAATGACTTTATCTCTTCCTGCAGGATTATCTCCTCAGGTAAGATGGTCTAGCGATCCTAAAGATATGTTCAGGATTTATCATGAAGGATTCAAACCAGATAATGTTGTAGTCGGTTTGAGCGAAGTGATCAACGCCTTGCAGCTGAAAAAATCTGGTGATGTAGCTCGTACATCAGATTTTGAATTCCGTAATTTGAAACTTGCCGCCGATCCTACTAATGACGAGCATGCTGTTCGTTTGTCTTATTTGAACAACAACGCATTTGTTCAGCGTGATGGAGTGTCATTACTCTCTGATTCAGATTGGAATGACACGAAATACCATAAACCAGGTTCGTATAACGTTCAAGGTGGCACTGGTCCTAACTCAGTTTATGCTGTTTTGACTGCAGCTAAACATCCTTTAGCATCATATTGCCAATGGGGTGTGTTGACTGTTTCATGGGTATCTGGAACGAATGCTTCTAGTACTACTCGAATGATTCAAGAATTCAAATCTATTTTGCGTGGTGTGAGTGCATGGAGATCATGCGAACGTGGAACATCATGGACTTCTTGGAATTTCCAATGGGACAATGCAGAAAATAACAATCTGTATCTGAGCAAGACTGGTGGTGATTCAACTTCTGGATCAATCAACTTAAGCAATAGCAGTTCTTGGTATAAACAATCAGGAATTGGTGTTATTTGCTTGAGACCTAGTGTTGGTACATCACAAAATGTCATTGTTCTAGGTGATGGAAATATCGGCAACATTGAATTTCGTCCAGCAACTGCTAATGGATTAATAGTCAATTCGAGAGATTCTGGTAATAACACTTGGAGAGTCTATCACCAAGGTTTCAAACCAGATAACGTTGACGTTGGATTAGGAAAAGTTCTTAACGTTGAACAAGTTCCTCTCGTTTCAACTAAAGCTCGTGGATCTACTGTCAATGTGGCTTGGGTTAAGATGGCTGAAGTTCGGCATACCGCTTCAGGAAATAGCTTCTTCCAATTCATGTCATATGGAAACGCTGGCGTAGGAGCTACAATTCGTTCGATTGACACCGTCGAATTATCAGGCAGATTCCCTAATCTTAGCGAATCTACTGTGACTATAACTGCAGCAAATATCAAAAATCAAATGAGACATCTTAAGTCTACATTTGAACCTAACAATGGTATCGCAAGGTATGGCTGCGTCAATAAACCTGGCTTGATTGAGCTGTGGATGAAAGTTCCAGCTTGGTATTCTTCAGAAACAAAATACAGTGTTGTTAGCAGTGCATTATCTACGTCGTTTATTGAAGATGCTGATTATGTTACAAGCGAACCTGCTGGCATTGTTTATGTTCCAATCGATTATCAATACAGCACAGATAATAAACCAGGTAAAGCTGATGTTGGTCTAGATAAAGTTGAGAACTACAAAGCTCTCCCAATTGACGGATCACAACCTTTGAACGGAACATTGGATATTACAAACGCCGCCCGAAGCCTTTACTATCAATCTAAGGGTTTCTCTGGTTTAACACCTACAACCTCTGGATCAACTGTAGTTCAGTGGAGAGGTTCTTATCTGAACTGGAACCAGGACGGCCAAGGTTCGACAGATATTATCAACCATCCTGGAGCAGCTTCAGGCGGATTTAAATTCTGGCAAGGAACTGCAAATAGTTCAGCTCCTTATAAGCAGATAGCATCCATTTCACCAACTGGAATGTTCAATGGACTTTCGTTCATGGCAACAGTTGATTCAATGGTTGATTTGGATCAGCTTGATATTCCTACAAATCAAAATGTATGGGATGATGGTATCCAAATAATGCAAGGTGCTGGTACTGCCAATAACGTCCCACGGGGTGGTCCATATCCTGGTAATACTGGATCTGCTCTTGGAACAGGTTTAAAATTCAAGTCCTCTGCTAACAGACACGGTCAAATCTGGCTTGAACCAGATTCAACTATGTGGTTCAGAACACTTCGATCGTCTGACCAAGGCGGAACATCTGGTTGGATTGCGAACTTAAGCAACAGGAACTTCAAAAACTACCTTGATCCTGAATATATTTCGGCAGGTGCTGTTATAGATTTTGGTGTCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9fc620a5e930f3ad4ecf734225bbb20166dc5a173173a19afaec25b529394eac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5324
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50