Protein

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Genbank accession
YP_009829792.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSSNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPVIASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPSARITKRLDFSDVYRVEWDIIPTASSDPVRIDFFGEIKND
Physico‐chemical
properties
protein length:295 AA
molecular weight: 33802,52640 Da
isoelectric point:4,91580
aromaticity:0,12881
hydropathy:-0,26169

Domains

Domains [InterPro]
IPR056389
ATT
1–293
IPR056389
YP_009829792.1
1 295
Architecture
ATT
ATT 1-293 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009829792.1
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 239 239 0,6765
Central domain 240 284 46 0,2169
C-terminal 285 295 10 0,6507
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-239
Central
240-284
C-terminal
285-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SP15
[NCBI] 		2184265 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus SP15
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009829792.1 [NCBI]
Genbank nucleotide accession
NC_048627 [NCBI]
CDS location
range 96363 -> 97250
strand -
CDS
ATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACCCCCTCTTCTATCTCTCTAGCAATAAATTTCAGTAATACTCTTACAGAGGCTAACTTCTTTGAATGGTTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTCCCACTATATAGTAGTAATATTGAACCTATTATGTTCAATATCTATATAGTAAATAAAGATAATAACTGTGTATATTTTGAAAACTGTTATGTATCTACGGTAGATTTTTCTTTAGATAAGAACATACCAATTCTTAATGTTGGTATTGAGTCTGGGAAATTCTCAGAAGTATCTACCTATAGAGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTACAGCCCAGTAATAGCTTCTACTAATGGCAGCATCTTACCCGGTCTTATTTCTGCCTCTTTATCTTTCCAACAGCAGTGCTCCTGGAGAGAGGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCTTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATATTACTTAAAACGTTTTGCAGGAGATATGGTTTACAATATCGAACCGGAGACAGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b7c4a0ee4327175c253c071c20f1989216bde6b5878a5c8254a7266efff502e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome analysis of Escherichia phage E0157 Sato,K., Ohishi,K., Azam,A.H., Miyanaga,K. and Tanji,Y. 1997 — GenBank