Protein

View in Explore
Genbank accession
GENB_98e71701dc95 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 0,63
Protein sequence
MAYQVYKVEKPKGVNFSLEPSQLDSTMWDEANEVSFKHGKTKKVSGYEQGLGQTGVLNDGSVYPEIILPLRDDTDENYWWAYASTKQDGTGEIYRIVTKDLHQDVTPSSGVPNEPDFRWFGDTINGVPYFMKAKPYVWDGVSKFEELETFPGHVKAQVMRTYGNHMVAMDFKVDNFTPPNDPQTPEEEYESGFSPWNEGRHRSAVWWSSAINTKDLSVSWADADPTTESGWNFLGGNGGPILGGKSLRESFIIYRERAVWQMSYIGGILVFAFKELFNDVGVLGPDCVAEIDGYHFVVGQSDIYMHNGVHKESVADGIVRQRIFDSIDPDHIDKVFVAVRYQEKEAWVCIPEASTNTNGRCNVAYVYNWEERHWSKRDMPDSLTSTYTILSITEGDITWQAPSEDASWEEATDLWISSYFKYNSSQWGLAFAGVTSDGKGAVYTTIEEPTWDGANFKAGVEKKWIDMEDYTTTKTLNKIWPLVRGGEVDVWVAGSETTTQSPVWRYVGRFDPNQRANLGCTATGKFIHIKFEIPEKSRAELRGYWLEYKATGAR
Physico‐chemical
properties
protein length:554 AA
molecular weight: 62807,09460 Da
isoelectric point:4,89642
aromaticity:0,13357
hydropathy:-0,53610

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_98e71701dc95
1 554
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9836
Central domain 62 260 200 0,2587
C-terminal 261 554 293 0,5422
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-260
C-terminal
261-554

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP506
[NCBI] 		2805828 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MW451248.1_CDS_[13921..15585] [NCBI]
Genbank nucleotide accession
MW451248.1 [NCBI]
CDS location
range 13921 -> 15585
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
84ac258251c8d7d06b1ad155d9f509635d3cc15acf66fdf70a4c4d505f53fd0c

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8228
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50