Protein

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Genbank accession
QVW08808.1 [GenBank]
Protein name
putative plant photosystem II stability/assembly factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MDRISDPTATEDRKFREASGELSATRLRALWLNGMQEEIASFIENEGIELSGSDLTQLRQALDLRFPRWRNAVAQAANFTELRALTGLVDGQVIHVSDDGQGGSGDYRIALSSIPERLPDVVELNSGQRAIREFQRTRRKAFESSTPAALFNIEDNTGTPKAFMTSGGILYGVLAGRVQSTLDGEAWVDGFDTPGGAAIVFGISCSDGEVVVATAASIWKSSGWPSAGTTWVKKFDSSGGSAAFSIGCLSGNGTKMIAGEYAGGGAGTGWEDSQKAWISTDSGETWSVAWDSAILFPGSYEDSHVHAVCYDESMDRFFVIEGHSVDQGIYWSDDLGGTWTKITGGFADEISGGQPTWMFPTRHGIVLGTDSAQQGVFLIRRAANGSELFLEWTFEINYGSNGLGLWAYRAYYDEITDTVYFGYRANSVHGVNKACIVATDGIGGAVVWESDTVASASNYDVAGLAVTPNGRFVWKTEGEVDAEYIADIGLPGALPTAKYDGGGVLGGKRTGNYGTSIAIGRGSEAAQSGIAIGAGVQTSADRQILIGGGAEAGGVSIIIGDSASSSGSQSVVVGVSSSCAANSAVIGGGATAGTSSVTVGQGSTSGDTAVTVGTFSTASNNSTVVGNSSDGTGAGTNVFGKNSEASGNNSSVFGSQASAPNVSAVAIGNFTDTQRDSSVCIGSRHLESTLAGGGIYLRSPDGSVWRASIDNTGAWNIVAG
Physico‐chemical
properties
protein length:720 AA
molecular weight: 74460,76220 Da
isoelectric point:4,56721
aromaticity:0,08611
hydropathy:-0,10736

Domains

Domains [InterPro]
DC_0512
STR
1–160
DC_0512 cd12820
QVW08808.1
1 720
Architecture
STR
STR
STR 1-160 | STR 582-683 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW08808.1
1 720
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9863
Central domain 147 350 205 0,5137
C-terminal 351 720 369 0,3235
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-350
C-terminal
351-720

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage CBW1004C-Prop1
[NCBI] 		2838316 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW08808.1 [NCBI]
Genbank nucleotide accession
MZ188970 [NCBI]
CDS location
range 32426 -> 34588
strand +
CDS
ATGGACCGTATTAGCGACCCGACAGCGACAGAAGACCGAAAATTCCGCGAGGCTTCAGGCGAACTTTCAGCCACCAGGCTTCGCGCTCTATGGCTCAACGGCATGCAGGAGGAGATAGCCTCTTTTATTGAAAATGAAGGGATTGAGCTTTCTGGTTCTGATCTGACTCAGCTGCGGCAGGCCCTGGATCTTCGTTTCCCGCGCTGGCGCAATGCAGTTGCCCAAGCCGCCAACTTCACCGAGCTTCGGGCGCTGACTGGGCTGGTGGATGGGCAGGTTATTCATGTCTCTGATGATGGGCAGGGGGGCAGTGGCGATTACCGAATAGCACTCTCATCTATCCCTGAGCGCCTTCCAGATGTAGTCGAGCTGAACAGCGGGCAGAGAGCGATTAGGGAGTTTCAGCGGACCCGCAGAAAGGCTTTTGAATCCTCTACGCCGGCGGCGCTGTTCAATATTGAAGACAACACCGGAACTCCAAAGGCTTTTATGACTTCCGGCGGCATTCTTTACGGTGTGTTGGCTGGCCGCGTTCAGTCAACGCTCGACGGTGAGGCCTGGGTTGACGGGTTCGACACGCCTGGCGGGGCCGCCATCGTGTTCGGTATTAGCTGCTCTGATGGCGAAGTGGTGGTCGCTACGGCGGCCAGCATTTGGAAGTCTTCGGGTTGGCCGTCTGCGGGGACCACATGGGTTAAAAAGTTTGACTCGTCTGGCGGTTCGGCTGCGTTTTCAATCGGTTGCCTCTCTGGGAATGGCACAAAAATGATCGCCGGGGAATACGCGGGTGGCGGTGCCGGGACGGGCTGGGAGGACTCGCAAAAGGCATGGATAAGCACGGACAGCGGTGAAACGTGGTCGGTCGCGTGGGACTCAGCGATACTTTTTCCCGGCTCTTATGAGGACTCTCACGTACATGCGGTCTGTTACGACGAGTCCATGGACCGGTTTTTTGTCATCGAGGGACACAGTGTCGATCAGGGCATTTACTGGAGTGACGATCTAGGCGGGACGTGGACTAAAATCACCGGGGGTTTCGCCGATGAAATATCGGGAGGGCAGCCCACTTGGATGTTCCCGACTCGCCACGGCATCGTCCTCGGGACTGATTCGGCACAGCAAGGGGTTTTCCTTATCCGCCGGGCGGCTAATGGCTCTGAGTTGTTCTTGGAGTGGACTTTCGAGATCAACTACGGCTCTAACGGCCTCGGGCTTTGGGCGTACAGGGCTTACTACGACGAGATTACTGACACTGTTTATTTTGGGTACCGAGCAAACTCAGTTCACGGGGTCAATAAAGCCTGCATTGTGGCAACTGATGGCATCGGTGGGGCGGTGGTGTGGGAATCAGACACGGTTGCTTCGGCCTCAAATTACGATGTGGCTGGGCTTGCAGTCACCCCCAACGGTCGGTTTGTCTGGAAGACCGAGGGGGAGGTAGACGCGGAGTACATCGCCGACATTGGCCTCCCCGGCGCGCTGCCGACCGCTAAATACGACGGTGGTGGCGTGCTAGGGGGCAAGCGAACCGGTAATTACGGGACTAGCATCGCGATCGGTCGCGGCTCAGAAGCAGCTCAAAGCGGCATCGCAATAGGCGCTGGCGTTCAGACTAGTGCCGATCGGCAGATCCTTATAGGGGGAGGTGCGGAGGCTGGCGGGGTTTCCATAATTATTGGCGACAGCGCCTCTTCGTCGGGGAGCCAGTCTGTCGTGGTAGGTGTGTCTTCCTCCTGCGCGGCCAACTCCGCTGTTATCGGTGGCGGTGCAACGGCTGGCACTTCAAGTGTGACTGTCGGGCAAGGCTCAACATCTGGCGACACCGCCGTAACGGTCGGCACTTTCTCGACGGCTTCCAATAACTCCACGGTTGTCGGCAATAGCTCCGATGGTACAGGTGCCGGCACAAATGTTTTCGGCAAAAACTCAGAGGCTTCCGGTAATAATTCCTCGGTATTTGGCAGTCAGGCTTCGGCCCCCAACGTCAGCGCGGTGGCAATAGGTAATTTTACCGACACCCAGCGAGACTCATCAGTTTGTATAGGAAGTAGGCATTTGGAGTCCACCTTGGCTGGAGGAGGAATCTATCTGAGGTCTCCTGATGGATCAGTCTGGCGGGCCAGCATCGACAATACGGGCGCCTGGAATATAGTGGCGGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b03f5a178f2794061436f485c6d7d5021123c1d3510d7f93ed55a175ab580ecf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7212
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50