Protein

View in Explore
Genbank accession
QHR67972.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVGEIQISALPQASLPIELSDIFHLKQGIEDKRCTLEQLLDPHASLRNNPHGVTKVQVELGNVLNALQLVAANNLSDIVDVAEARANLQIMSSDEVNQLIQAHINDKNNPHNTTKSQVGLGNVQNWLASNAYNEDADKYATARAVNSLYRAVQASYPVGTIHLSMNAANPSTYLICGGTWELVSRGRALVGYDSASRPAGSTFGSQTAALTANNIPAHTHSVYVTGGGHSHGATASISSFDYGNRSTTTFDYGTKTTSSFNYGNKTTSSAGFTQTTWINRGYDPGSHPGLSVVGADYDPRATLTTANNHTHTVAIGAHTHTVAIGAHSHSVSIGSHSHTATVTVTGAGEHSHSGTTGSTGSGQAFNIEQPSFVLYVWQRTA
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40330,77000 Da
isoelectric point:6,37770
aromaticity:0,06545
hydropathy:-0,29817

Domains

Domains [InterPro]
DC_1039
STR
1–382
DC_1039
IPR051934
Unmapped
119–346
IPR051934
SSF88874
STR
152–285
SSF88874
IPR053827
ATT
154–249
IPR053827
QHR67972.1
1 382
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-249 | STR 250-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage mistaenkt
[NCBI] 		2696420 Uroviricota > Caudoviricetes > Andersonviridae > Mooglevirus > Mooglevirus mistaenkt
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR67972.1 [NCBI]
Genbank nucleotide accession
MN850587 [NCBI]
CDS location
range 49167 -> 50315
strand -
CDS
ATGGCAGTAGGTGAAATTCAAATTAGTGCCTTGCCTCAAGCGTCGTTACCAATTGAGCTAAGTGATATCTTCCACCTTAAACAAGGTATTGAAGACAAAAGATGTACACTTGAACAATTACTTGACCCTCACGCATCCTTGAGAAATAACCCTCACGGTGTTACAAAGGTTCAGGTTGAGTTAGGTAACGTATTAAACGCTTTACAGCTTGTCGCTGCAAATAACTTATCAGATATCGTTGACGTAGCTGAAGCAAGAGCGAACTTACAGATTATGTCTTCTGATGAAGTTAATCAACTTATTCAGGCTCACATTAATGACAAGAACAACCCTCACAATACAACTAAATCACAAGTTGGCTTGGGTAATGTTCAGAACTGGTTAGCCTCTAACGCATATAATGAAGATGCTGATAAGTATGCTACAGCAAGAGCAGTTAATAGTCTATACAGGGCTGTTCAGGCTTCGTATCCAGTGGGTACTATCCACTTGTCTATGAATGCTGCTAACCCATCTACTTACCTGATTTGTGGAGGTACTTGGGAGCTAGTTTCAAGAGGTAGAGCACTTGTAGGCTATGATAGTGCTTCGAGACCAGCAGGTTCTACGTTTGGTTCTCAGACTGCTGCATTGACAGCTAATAACATCCCTGCTCACACTCACTCAGTGTACGTTACAGGTGGTGGTCACTCACATGGTGCAACTGCTTCAATCAGTTCATTTGACTATGGGAATAGAAGCACTACAACATTTGATTATGGTACTAAGACCACATCATCATTTAACTATGGTAATAAAACTACGAGTTCTGCTGGATTCACTCAGACAACGTGGATTAACCGTGGTTATGACCCAGGGAGTCATCCGGGACTTTCAGTAGTTGGTGCAGACTATGACCCAAGAGCCACTCTGACAACCGCTAACAACCATACGCACACTGTAGCGATTGGTGCGCACACTCATACTGTAGCGATTGGTGCTCATAGCCACTCTGTATCAATTGGTAGCCACTCGCATACTGCTACTGTAACTGTTACAGGTGCAGGTGAACACTCTCACTCTGGTACAACTGGCTCAACTGGTTCTGGTCAGGCATTTAACATTGAACAGCCATCATTTGTTCTATATGTATGGCAGAGAACTGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
26a96c67f27484ecf9120756de2d2d8ea087cc832cd81833d6fbdbeca3872c18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank