Protein

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Genbank accession
AII27137.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MPIGVNVSGTNKQATMKVNVSGVWKYPIGWVREGGQWRKFQNPEYTYTISQNTANFNLATAVGSREEVIINLVINPGVSVYSTSVNTPAIVIPDSFAGKTINIINNGNIYGQGGVGGTGVGQAGGPALRVQTSQKINLTNNGTIAGGGGGGGKGGTGGNGFFTTQSTQRDPASGTWSYATGNHIEFRSRNCILRMGGGEIYRWYGPDFSTVVTYGITITVGEWTYYASNFYNDGVGVLKSNAMYRTRAVTNTTYTTGGAGGNGGNGQGFSQAATNGLAGANGGTNAGRGGNGGTGGTFGVAGNAGASGANGNQTAGLAGQAGGAAGAAVDGTSKVNYVNAGKLLGPLIN
Physico‐chemical
properties
protein length:349 AA
molecular weight: 35203,30740 Da
isoelectric point:9,68194
aromaticity:0,08883
hydropathy:-0,25043

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_1092
IPR007932
RBD
65–156
IPR007932
AII27137.1
1 349
Architecture
ATT
RBD
ATT 1-160 | RBD 196-348 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP2_2013_A_Haiti
[NCBI] 		1529058 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AII27137.1 [NCBI]
Genbank nucleotide accession
KM224879.1 [NCBI]
CDS location
range 21187 -> 22236
strand -
CDS
ATGCCTATTGGGGTAAATGTATCAGGTACTAATAAACAAGCGACCATGAAAGTTAATGTCAGTGGGGTATGGAAATATCCCATCGGATGGGTTCGTGAGGGAGGACAGTGGAGAAAGTTCCAAAATCCAGAATACACATATACGATTAGTCAGAATACTGCAAACTTTAACCTAGCTACAGCAGTAGGCAGTAGAGAAGAGGTTATCATTAATCTGGTGATTAACCCAGGCGTTAGTGTGTACTCCACGAGTGTTAATACGCCAGCAATTGTGATTCCAGATAGCTTTGCAGGAAAGACCATTAACATTATCAATAATGGTAACATCTACGGCCAAGGGGGAGTGGGAGGTACTGGAGTAGGTCAGGCAGGTGGTCCTGCTCTACGAGTTCAGACTTCTCAAAAGATTAACCTAACCAATAACGGTACAATCGCCGGAGGCGGCGGCGGTGGAGGTAAAGGTGGTACTGGTGGTAACGGGTTCTTTACTACCCAATCTACTCAACGTGACCCTGCATCCGGTACTTGGTCTTACGCAACAGGGAACCATATTGAGTTCCGTTCTCGTAACTGTATTCTGCGTATGGGAGGTGGAGAAATCTACCGTTGGTACGGCCCAGACTTTAGTACAGTTGTTACCTACGGTATCACTATAACGGTGGGAGAGTGGACATATTACGCCTCCAACTTCTACAATGATGGTGTTGGTGTTTTAAAGTCGAATGCAATGTACAGAACAAGAGCAGTTACCAATACGACATACACTACTGGTGGTGCGGGCGGTAATGGTGGTAACGGTCAGGGATTCTCTCAAGCTGCAACCAACGGTTTAGCTGGTGCTAACGGTGGTACTAATGCAGGACGAGGAGGTAATGGCGGTACGGGAGGAACTTTTGGAGTGGCAGGAAATGCTGGTGCATCTGGTGCTAACGGGAACCAAACTGCTGGTTTAGCAGGACAGGCTGGAGGCGCTGCTGGCGCTGCTGTAGACGGGACTTCCAAAGTCAACTACGTCAATGCTGGTAAACTATTAGGCCCCCTAATTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4180d89afedebae3392296ec2c093955bd530e5905800d272bf4db776bc2e3ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7943
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50