Protein

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Genbank accession
UKM96436.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYNAFSHAIKEVQDNVPLEANILNKTGDVIGGTILSAPKQIKYSISKGNTRVQGNVTNFSNVSGDSKITITIPKDVVIPGRQTLVFSFLHSFKDEVISLDFSSTYVSDFATTNTDNIKNDEYRKVRLSFTLGENAHNADIVIVMSARERNLVSCTIAEDFVTSGLIGVPYSLKADSLIALDEGAMLPKSTQSTLDCNTIRTPYIGYTANAINAPQGEKLGTLMVFVTAETSKLTQVFTGNTSGKVYYRTMNIANTFSSWAEVLTGSALADALTNYTTKEDLKKATAGMLTEGSATNWQKFKVTDDSGISIMKSGYDLLNVDDLTNLDVYVTSATNIPAVGNSGFYTRRVRSGPYIDVTFAQHSTASLIWRNSYNGGVNKWSGWTKLITEEVTATWQKKAITADSGAQLRLENVDLNVSVVPGEYYANSCTNTPSSEGNGYLTIKAGNLGGSNVNNYFTQIYTGYVSGEMYSRSKKQGDPLTAWTPWVKLLSEHDSMLDTSNKSRIYLPAGADILTLPSGFYEGTKIANSPYPDTDASWKLVDVFQASSGGRKEFKVVQNADGRLWYKTIHTDGVGGRDWWTVADSGVTQNNKVTGDDGMPLLYLSNSADDLLDVVNRNPGFKSGYAHYTVSNGLGNGRSFRFIANTFNKNGYIHAVDTQGQSYTRTLNGGVWSTWQSVATYEALNSASARNFEFIDAITPVTLWEGSAQGGTGTYYKLKRPITDFTRIKVWHSSSVYKYNVSEFYVPSSTEGLGSFIIGATNLADATGGSPTIYELALDFSRVTSFTIPRDSRYNVVNSEAILKSNSTIIQKVEGIVK
Physico‐chemical
properties
protein length:818 AA
molecular weight: 89321,64980 Da
isoelectric point:6,21213
aromaticity:0,10391
hydropathy:-0,27433

Domains

Domains [InterPro]
DC_1143
STR
40–280
DC_1143 DC_0678 DC_0151
cd19958
STR
192–262
cd19958 DC_0244 cd19958
UKM96436.1
1 818
Architecture
STR
RBD
STR 40-655 | RBD 662-818
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKM96436.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,5524
Central domain 84 291 209 0,1706
C-terminal 292 818 526 0,6170
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-291
C-terminal
292-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Brochothrix phage ADU4
[NCBI] 		2914025 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brochothrix thermosphacta
[NCBI] 		2756 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM96436.1 [NCBI]
Genbank nucleotide accession
OM135992 [NCBI]
CDS location
range 12056 -> 14512
strand -
CDS
ATGTACAATGCGTTTTCCCACGCAATTAAAGAGGTACAAGACAACGTCCCGCTAGAAGCAAATATATTAAATAAAACAGGTGACGTTATAGGAGGCACCATTCTAAGCGCACCAAAACAGATTAAGTATAGTATAAGCAAGGGTAACACTAGGGTTCAGGGTAACGTTACCAACTTCTCTAACGTATCCGGCGACTCTAAAATCACAATTACTATTCCGAAAGATGTTGTTATCCCGGGAAGACAAACACTTGTATTTTCTTTCTTACATTCATTCAAAGACGAAGTAATTAGCCTTGATTTCTCGTCTACGTACGTGTCTGACTTTGCGACAACTAACACAGACAATATCAAAAATGACGAGTACCGTAAGGTAAGGCTATCTTTCACCTTAGGTGAAAATGCGCATAATGCTGATATTGTAATTGTCATGAGTGCGAGAGAGCGCAACTTAGTCTCATGTACAATCGCAGAGGATTTTGTTACATCGGGGTTGATTGGTGTTCCCTACTCTCTTAAAGCAGACTCTTTGATTGCCTTGGACGAAGGGGCTATGCTACCTAAGAGTACACAGTCTACTCTGGACTGTAATACTATACGAACACCTTACATTGGTTACACCGCTAACGCAATTAACGCTCCCCAAGGAGAAAAACTCGGTACTTTAATGGTGTTCGTTACAGCGGAAACAAGTAAACTAACTCAAGTATTTACCGGTAACACGTCAGGTAAGGTATACTACCGTACAATGAACATTGCAAATACTTTTTCTAGCTGGGCGGAAGTGTTAACTGGTTCTGCTCTTGCGGATGCACTGACAAATTATACAACGAAAGAGGACCTTAAAAAAGCGACAGCAGGTATGCTAACAGAGGGGTCTGCAACGAATTGGCAGAAATTTAAAGTGACAGATGACAGTGGTATATCAATTATGAAGAGCGGTTACGATTTACTAAACGTAGATGACTTAACAAACTTAGATGTCTACGTAACCAGCGCAACGAATATACCTGCGGTCGGTAATTCGGGATTTTACACTAGACGTGTCCGTTCGGGTCCTTATATTGACGTGACATTTGCGCAACACTCAACTGCATCCCTTATTTGGCGTAACTCATATAATGGAGGTGTTAATAAGTGGTCAGGTTGGACTAAACTCATCACAGAGGAGGTCACAGCGACTTGGCAGAAAAAAGCTATTACGGCTGATAGCGGGGCACAACTACGCCTAGAAAACGTAGACTTGAACGTATCTGTTGTTCCGGGAGAGTACTACGCAAACTCATGTACGAACACTCCTTCTTCGGAAGGTAACGGTTACTTAACTATTAAGGCAGGAAACTTAGGTGGCTCGAACGTAAACAACTATTTCACACAGATTTACACGGGCTATGTGTCTGGCGAGATGTACTCTAGGTCTAAAAAACAAGGAGACCCATTGACTGCATGGACACCTTGGGTAAAGTTATTGTCAGAGCACGACTCTATGCTGGATACGTCCAATAAATCTAGGATTTACCTACCGGCAGGCGCAGACATCTTAACACTTCCTTCTGGCTTTTATGAAGGTACTAAGATAGCTAACAGCCCCTACCCAGATACCGACGCTTCTTGGAAGTTGGTTGATGTTTTTCAAGCTAGCTCAGGAGGACGTAAGGAGTTTAAGGTTGTCCAAAATGCGGATGGGCGTTTGTGGTATAAAACTATACACACGGACGGAGTAGGTGGCAGAGATTGGTGGACGGTAGCTGATAGCGGAGTTACTCAAAACAACAAAGTAACAGGTGACGATGGGATGCCGTTGTTATATTTAAGTAATAGTGCGGATGACTTGCTTGATGTCGTTAACCGTAACCCCGGATTTAAATCAGGGTACGCCCACTATACAGTATCTAATGGTTTAGGTAACGGTAGAAGTTTTAGATTTATAGCAAATACCTTTAACAAAAATGGGTATATCCACGCTGTGGACACTCAGGGGCAATCGTATACTCGAACGCTCAATGGGGGCGTTTGGAGTACATGGCAGAGTGTAGCTACGTACGAAGCCTTAAACTCAGCATCTGCTCGGAATTTTGAATTTATTGATGCTATCACTCCCGTAACTCTGTGGGAGGGCTCTGCTCAAGGAGGCACAGGTACATACTACAAACTAAAAAGACCTATCACCGACTTCACAAGGATAAAGGTATGGCACTCGTCAAGTGTGTACAAGTATAATGTATCTGAGTTCTATGTCCCCTCTTCTACGGAAGGCTTGGGTTCTTTCATTATTGGTGCGACAAACCTTGCGGACGCTACAGGAGGGTCGCCTACCATATATGAGTTAGCGTTAGACTTCTCGAGGGTTACCTCATTTACGATACCACGAGATTCGAGATACAACGTAGTCAATTCCGAGGCGATACTTAAGTCTAACTCAACGATTATACAAAAGGTAGAAGGGATTGTGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e2a54450f29bf6b89c9b1640692d0de3f10b64a50227390ddd89f8f9e613750e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2883
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Brochothrix phage ADU4 Karaynir,A., Salih,H., Bozdogan,B., Guclu,O. and Keskin,D. 2022 36064042 GenBank