Protein

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Genbank accession
AZU98467.1 [GenBank]
Protein name
DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFTRILNYANIAPGLPSIKKILSYNTRGLILLENGDLYAHGVDNDYLWGGSTALNITGDIVLSAQDVVNFWTGYVTFAHKTDGKMYATGSLYCFHNANTIQQGFTDVSQYFSAFDISNIKNIIAGYTVFVLLNDGKLYGRGYNRNGSIGNGTKTFVSDWVLMSENVKSVFGDAGGDTCFIVKNDNTIWGAGNNNSLQINDQPGDKVTFTEVLKDISFTPNTIYYNNGIIVISTDNIIHVTGTSNTGVSGLSQKSINVGFNIGDMSKFYNDNISPSPSRLYLHNSDTNKLVSTGYSPINSQSSNNLPYFESWKEVDFSSYNTNMSYSGGTYINYFWSGNKIWMSGYPPSSMAGKNYSICQTPLSYIISEQTDLPF
Physico‐chemical
properties
protein length:376 AA
molecular weight: 41447,67750 Da
isoelectric point:5,30805
aromaticity:0,13298
hydropathy:-0,21755

Domains

Domains [InterPro]
DC_0433
ATT
1–115
DC_0433 DC_0433
IPR009091
STR
6–341
IPR009091
IPR009091
STR
15–253
IPR009091
AZU98467.1
1 376
Architecture
ATT
STR
ATT 1-240 | STR 241-341 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU98467.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,1538
Central domain 200 365 167 0,6115
C-terminal 366 376 10 0,8766
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-365
C-terminal
366-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Munch
[NCBI] 		2500169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU98467.1 [NCBI]
Genbank nucleotide accession
MK268344 [NCBI]
CDS location
range 331600 -> 332730
strand -
CDS
ATGATACCATTCACTCGTATATTAAATTATGCTAATATAGCACCCGGATTACCAAGTATTAAAAAAATTTTGTCATATAACACCCGTGGTCTGATCCTCTTAGAAAACGGGGATTTATATGCACATGGTGTTGATAATGATTACCTATGGGGTGGAAGTACAGCTTTGAATATAACAGGAGATATTGTCTTGTCTGCACAAGATGTTGTAAACTTCTGGACAGGGTATGTTACTTTTGCTCATAAGACTGATGGTAAAATGTATGCTACTGGATCATTATATTGCTTTCATAATGCGAATACAATCCAGCAGGGATTTACAGATGTAAGTCAGTACTTTTCAGCTTTCGATATATCTAATATTAAAAATATTATCGCTGGATACACTGTCTTTGTTTTGTTAAATGATGGTAAACTTTATGGTAGAGGATATAATCGCAATGGTTCTATTGGAAATGGAACTAAAACATTTGTTAGTGATTGGGTATTAATGTCTGAAAATGTTAAAAGTGTTTTTGGTGATGCTGGCGGAGACACATGTTTTATTGTAAAAAATGATAATACTATTTGGGGTGCTGGAAATAATAACTCCCTGCAAATAAATGACCAACCGGGAGATAAAGTTACGTTTACCGAAGTACTTAAAGATATATCTTTCACACCTAATACCATTTATTATAATAATGGTATAATTGTTATAAGTACTGATAATATTATCCATGTTACCGGTACATCAAATACAGGGGTTTCAGGTTTAAGTCAAAAAAGTATTAATGTTGGATTCAATATAGGTGACATGAGTAAATTTTATAATGACAATATATCTCCATCTCCTAGTAGATTATATCTACACAATTCTGATACAAATAAACTTGTTAGTACAGGGTATAGTCCTATTAATAGTCAGTCCAGCAATAATTTACCATATTTTGAATCATGGAAAGAAGTAGATTTCAGTTCTTATAATACGAATATGTCATATAGTGGTGGAACGTATATTAATTATTTCTGGTCAGGTAATAAAATTTGGATGAGTGGATATCCACCTAGTAGTATGGCTGGTAAAAATTATTCGATATGCCAAACACCATTGAGTTATATTATTTCTGAACAGACGGATTTACCTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c8d63ae9649f5f3ae56749931d238caf58cc6eeba8d4cba0a5c875f37047ed0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella myophage Munch Crosby,S.T., O'Leary,C.J., Xie,Y., Gill,J. and Liu,M. 1988 — GenBank