Protein

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Genbank accession
AIA65086.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGDFVQVPSGISDIMRDWANDLKNDINSKIPYEIFIEASSPLFIGGKTQDGNTTITLSAKVKWAGKDVTNIFESTDFTWSRYTSAGVLDNSFTATGRAISVTSGNESQFKYEVSLNY
Physico‐chemical
properties
protein length:117 AA
molecular weight: 12891,13330 Da
isoelectric point:4,61995
aromaticity:0,11966
hydropathy:-0,29145

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage IME-EFm1
[NCBI] 		1445858 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIA65086.1 [NCBI]
Genbank nucleotide accession
KJ010489.1 [NCBI]
CDS location
range 17985 -> 18338
strand +
CDS
TTGGGAGATTTTGTTCAAGTACCAAGTGGAATTAGTGATATCATGCGTGACTGGGCAAATGATTTGAAAAATGACATTAATTCTAAGATACCTTATGAGATATTTATTGAAGCCTCTTCACCGTTGTTTATTGGAGGTAAAACACAAGATGGAAACACCACAATCACACTTAGTGCCAAAGTAAAGTGGGCTGGAAAAGATGTAACAAACATTTTTGAGTCTACAGATTTCACATGGTCTAGGTACACGTCAGCTGGAGTATTAGACAATTCATTTACAGCTACTGGTAGAGCAATCTCAGTTACATCTGGCAACGAGTCGCAATTTAAATATGAAGTATCATTAAACTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
440a70ba457656def244bc78e39c109718319db4c8d9f93c23368e5968e8447c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8168
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence analysis of novel bacteriophage IME-EFm1 infecting Enterococcus faecium Wang,Y., Wang,W., Lv,Y., Zheng,W., Mi,Z., Pei,G., An,X., Xu,X., Han,C., Liu,J., Zhou,C. and Tong,Y. 2014 25078302 GenBank