Protein

View in Explore
Genbank accession
YP_010747348.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPIEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSILIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGRGSVVVGAYMESVTTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKDQNISSVLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVLYPVWDGFDLGADTDMNPEADRPGDYSVSQYPVHMLPLNHLIDNLLVRGCLGVGFAWMGKGYTFLT
Physico‐chemical
properties
protein length:474 AA
molecular weight: 50997,42370 Da
isoelectric point:4,85907
aromaticity:0,10549
hydropathy:-0,19726

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
92–132
IPR040775 IPR012332
IPR015331
RBD
138–470
IPR015331
YP_010747348.1
1 474
Architecture
ATT
STR
ATT 65-135 | STR 136-473 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010747348.1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9925
Central domain 156 463 309 0,9969
C-terminal 464 474 10 0,0888
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-463
C-terminal
464-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage NBSal006
[NCBI] 		2749668 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus NBSal006
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010747348.1 [NCBI]
Genbank nucleotide accession
NC_073196 [NCBI]
CDS location
range 1 -> 41850
strand -
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATAACCGGCAAACAGGGTGGTGTAGCGGGTGGCGCAGATATCGACTACGCTACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCCGCGGTTTTACGTGATGCTGGTTTCTCCCCAGCATCTTTCAACTTCACAACCGGCGGGACGCTAGGGGTTAACGACGCGGATAAAGCGGTTCTTTGGCCTATTGAAGACGGCGGAGACGGTAACTATTACGCATGGCGCGGGTCTCTCCCTAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGTGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTTCGCGCAGAAGCGGATAAGAAATTTAAATACTCCGTTAAGTTGTCGGATTTTACCACTTTACAGCAATTAGCTGATGCTGCCGTCGACAGCATTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAACTTCGGCGGTAAGACCCTAACCATCGACTGTAAAGCGAAGTTTATTGGCGACGGTAACCTTGTTTTCACACAACTTGGTAGAGGGTCCGTTGTAGTTGGTGCTTACATGGAGAGTGTCACAACGCCGTGGGTGATTAAACCGTGGACTGACGATAATCAGTGGATAACCGACCCCGCAGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCTACGGTAAACGATTACGCCAAGTTCCCGGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGACCAGAACATTTCGTCTGTTCTTGAGATACGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGACGGCGTAATTACCTTTGAAAACCTGAGCGGGGATTGGGGTAAAGGAAACTATGTCATTGGCGGGCGTACAAGTTACGGTTCGGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGGGTTATTGGGTTTACCTCATACCGTGCCGGCGAGAGCGGAGTTAAGACATGGCAGGGGACTGTAGGTTCCACAACGTCACGAAATTATAATCTTCAATTCCGCGATTCCGTAGTTTTGTACCCGGTATGGGACGGATTCGATTTAGGCGCAGATACCGACATGAACCCGGAAGCAGATAGGCCGGGGGATTACTCTGTATCTCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGAGTTGGCTTCGCATGGATGGGCAAGGGCTATACGTTTCTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b41686c4a950fd309f5317bcc0b9002e203b23b3f7af96d4efdf0dba957f231
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7604
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50