Protein

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Genbank accession
WMM35088.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYTADKAVTDASITSINESIGNINTALGGINTSLSNKAAKGVNNDITELNALTKAITIAQGGTGATTLENARTNLQVERLRQQDNGTFVVSPNGKYSFFIYNSGDFGLIDSATAAVSAMKVAFGGTGGTTPKDARKSLNIPVGALAELIPNGENILNYVAVAGQSGYYSSGELVVNGPPKQEGWWTYNFHCHGVDINGAAQYGVLRAVGLSGSSWINVLDGTGNWRGWQEQFNTQSTIPLTKGGTGATSVESAKINFGIDRFKQSATETMMYAPGVPYRITSRPNGEWGCWRDDNGSWIPLPIAAGGTGGNTPTQVRTNLELTEWGLLPSMSGKYPGGFNFDNLVVNSTFTVPPTPGSNITGVRPFQQIAGLDDGWFYLETLVHPDTGYAMQRATQMTGAWAGSVSIRIKQGGTWSVWKQASANFGLLATPVDNRATFRSSGIATGGSGCLVGGTIKGGAFTEWRDRPCGMLVEHEGVDAAYAIWKSVKWGVDWVSGMDAVLWSAGGAQLSLYCKGAEYRFDSAGAAAAGSWVSTSDIRMKANLQKIDTARDKLRSLVGYTYYKRNKLEEDKDTIYSIEAGVIAQDVQSVLPEAVYKIEPQKEDSMLGVSHAGVNALLVNAVNELSEIVDQQKQEIDELKKLVKQLLDK
Physico‐chemical
properties
protein length:696 AA
molecular weight: 74290,60810 Da
isoelectric point:5,92424
aromaticity:0,08764
hydropathy:-0,19727

Domains

Domains [InterPro]
DC_0195
STR
2–696
DC_0195
IPR030392
CHP
583–683
IPR030392
IPR030392
CHP
583–643
IPR030392 Coil
WMM35088.1
1 696
Architecture
STR
STR 2-696
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM35088.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,9419
Central domain 128 338 212 0,1199
C-terminal 339 696 357 0,9222
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-338
C-terminal
339-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage EH3
[NCBI] 		2986508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM35088.1 [NCBI]
Genbank nucleotide accession
OR413344.1 [NCBI]
CDS location
range 85253 -> 87343
strand -
CDS
ATGTCACGTAATTTAATGCCAAAATCTGGCGCAATGGCGCCTTACGTTGTAGTTAACAGAGACGCAGCAGTAGCTGGTGTTTTCTCTGTTGATGGGGAAGCTGGTGCTGTTGTACTAACTTCCAAATACCTACAAATATCTAAGTATACTGCTGATAAGGCAGTTACAGATGCTTCTATTACTAGCATTAATGAATCAATTGGAAACATTAATACTGCTTTGGGAGGCATCAATACCTCCCTAAGCAATAAGGCAGCTAAAGGGGTTAATAACGATATTACAGAACTAAACGCCCTGACAAAAGCTATTACTATTGCTCAAGGTGGTACAGGAGCAACAACGCTAGAAAATGCTAGAACAAATTTACAAGTAGAACGCCTACGTCAGCAAGATAATGGTACTTTTGTAGTTTCTCCTAATGGTAAATATTCTTTCTTTATTTATAATAGCGGTGATTTCGGATTAATAGATAGTGCTACAGCTGCAGTATCTGCTATGAAAGTAGCTTTTGGTGGTACTGGTGGTACTACTCCGAAAGATGCTAGGAAAAGCCTTAATATTCCTGTAGGTGCTCTTGCTGAATTAATCCCTAATGGTGAAAATATTTTAAATTATGTAGCAGTTGCAGGTCAGAGTGGTTATTACTCATCTGGAGAATTAGTAGTTAACGGACCCCCTAAACAGGAGGGATGGTGGACCTATAATTTCCACTGTCATGGTGTGGATATAAATGGGGCTGCACAATATGGAGTATTACGGGCGGTTGGATTATCTGGTAGTTCCTGGATAAATGTGCTAGACGGTACGGGTAACTGGAGAGGTTGGCAGGAGCAGTTTAATACGCAATCTACTATTCCTCTAACAAAGGGAGGTACGGGCGCTACTTCAGTAGAAAGTGCGAAAATTAATTTTGGAATTGACAGGTTCAAGCAATCGGCAACAGAAACTATGATGTATGCTCCTGGAGTCCCTTATAGAATTACATCTAGACCTAATGGAGAATGGGGTTGCTGGAGAGATGATAATGGTAGTTGGATACCTCTCCCTATAGCTGCTGGAGGTACAGGCGGAAATACCCCTACTCAAGTTAGAACAAATCTTGAATTGACCGAGTGGGGTCTTTTACCTTCTATGTCTGGTAAATACCCAGGAGGGTTTAACTTTGATAACCTAGTAGTGAATAGTACATTTACTGTACCTCCTACTCCTGGATCTAATATTACAGGTGTGAGACCTTTTCAGCAAATAGCAGGCTTAGATGATGGTTGGTTCTACCTAGAAACTTTAGTACACCCAGATACTGGATACGCTATGCAGCGTGCTACCCAAATGACCGGAGCTTGGGCAGGTTCAGTTTCAATACGTATTAAGCAAGGGGGTACTTGGAGTGTTTGGAAACAGGCTAGTGCGAATTTTGGTCTACTTGCTACTCCTGTTGATAATAGAGCTACTTTTAGAAGCTCTGGTATTGCAACTGGCGGTTCAGGTTGTCTAGTAGGTGGTACTATAAAGGGCGGGGCTTTCACTGAGTGGAGAGATAGGCCTTGTGGTATGCTGGTAGAACATGAAGGCGTGGATGCCGCATATGCTATATGGAAAAGTGTTAAATGGGGCGTAGATTGGGTCTCTGGAATGGATGCTGTTTTGTGGTCCGCTGGAGGCGCCCAACTTAGTTTATATTGTAAGGGGGCTGAGTATCGTTTTGATAGTGCAGGGGCTGCTGCTGCAGGTAGCTGGGTTAGTACTTCAGATATTCGTATGAAGGCTAATCTTCAGAAAATAGATACTGCGCGCGATAAACTTAGGTCCCTTGTAGGCTATACATACTATAAGAGAAATAAACTTGAGGAAGACAAAGACACTATATATAGTATTGAAGCTGGTGTTATTGCTCAAGATGTACAGTCTGTTCTTCCAGAAGCAGTATATAAGATTGAACCACAAAAAGAAGATAGTATGCTTGGCGTATCTCATGCTGGAGTCAACGCTCTTCTAGTTAACGCTGTAAATGAGCTTAGCGAAATTGTTGATCAGCAAAAGCAAGAGATTGATGAACTCAAGAAATTGGTAAAACAGCTACTTGATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19b8a36f317e9dd7ed782a5b3cc010acf5a27c97a477613da8f74f3820fdde77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7351
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Salmonella and Escherichia coli-specific bacteriophages collected from Minnesota Wastewater Treatment Plant Cortes Ortega,E., Hansen,E.G., Farmer,M.L., Martinez-Villalobos,J.M. and Bowden,S.D. 2024-11-27 — GenBank