Protein

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Genbank accession
ALO80259.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,66
Protein sequence
MSNTDNCKQTNIPETDNTALECPIFLQDTCVIVKDGQPFILSDSNISLTEYNEKLIEKLVEFNQKITLLENSNPELMDFSFSIQETTLALLVSDNIVASIDLQSLITGGVTEAKEVFIAVGGETTLTLSNNALSTTVNQVSIEGIVQLEGSSNDYSLTNNIVYFSDPLESGEIVQVIYKY
Physico‐chemical
properties
protein length:180 AA
molecular weight: 19757,90380 Da
isoelectric point:4,05003
aromaticity:0,06667
hydropathy:0,01778

Domains

Domains [InterPro]
Coil
Unmapped
52–72
Coil
DC_0116
ATT
56–179
DC_0116
ALO80259.1
1 180
Architecture
ATT
ATT 56-179 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1_18
[NCBI] 		1747285 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80259.1 [NCBI]
Genbank nucleotide accession
KT962246 [NCBI]
CDS location
range 67869 -> 68411
strand -
CDS
ATGTCAAATACAGATAACTGCAAACAAACTAATATTCCTGAAACGGATAATACAGCTTTAGAGTGTCCTATATTTTTACAAGACACATGTGTAATAGTAAAAGATGGACAACCTTTTATACTCTCAGATTCAAATATATCTCTTACAGAATATAATGAGAAATTAATAGAAAAGTTAGTAGAGTTTAATCAAAAAATTACCTTATTAGAAAACTCTAACCCTGAGTTAATGGACTTCTCTTTTAGTATTCAAGAGACTACATTAGCTTTACTTGTGTCTGATAATATAGTTGCATCTATAGATTTACAAAGTTTAATTACTGGAGGTGTAACAGAGGCAAAAGAAGTTTTCATAGCAGTAGGAGGAGAAACTACTCTGACTTTAAGCAACAATGCTTTATCTACAACTGTGAATCAAGTTTCAATAGAAGGAATAGTGCAATTAGAAGGATCTTCTAACGACTACTCATTAACAAACAACATAGTCTATTTCAGTGATCCTTTAGAATCAGGAGAGATAGTGCAAGTAATATATAAATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
86a42f9ed069f0209d227481c7b9749a5b66765e56ca1859cbc9c453ab9478a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank