Protein

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Genbank accession
YP_010682445.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHEIGNERDITTDSAPKMGVNIQRVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDSGMFHHVREQAARVLHTETPVELKLPDEPDRYYLAIVKGDVTLKGISDWYDQTEIEFFVPDGVAHSTTYRSFETPKIEDNKMVFDLVNDGSVNANPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNGEHRIPNGLSQGLKNIGISNDVNDTKPNGSLYIDNAWGRPHIALQSGQVASVSFDIPRDSTGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETYKRYNGLGCEYNFLAGDGKGGFRIVDRKNFLGTHIEQHNPFNEPRGWSDIMRFDDVVQYYWWGSYPRYSIPEIKGKKSDKIHFIFGKVGNAPLVTHMYLDDFIYRKDYVFGVRDIPNRYRAGGKVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVSVKFEERYL
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57871,15110 Da
isoelectric point:5,39035
aromaticity:0,12133
hydropathy:-0,43346

Domains

Domains [InterPro]
DC_0077
STR
1–511
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
14–137
IPR008841
IPR006520
Unmapped
84–143
IPR006520
YP_010682445.1
1 511
Architecture
ATT
STR
ATT 1-143 | STR 144-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010682445.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,8862
Central domain 203 401 200 0,2426
C-terminal 402 511 109 0,5239
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-401
C-terminal
402-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC1152
[NCBI] 		2365029 Uroviricota > Caudoviricetes > Aliceevansviridae > Brussowvirus CHPC1152 >
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010682445.1 [NCBI]
Genbank nucleotide accession
NC_071063 [NCBI]
CDS location
range 15637 -> 17172
strand +
CDS
ATGGCTGTGTTTCAATTCAACGGATATGATTTAAATGATTACTTTAAACTAATCAAAGTGTCGCACGAAATCGGGAATGAACGCGATATCACTACAGACTCAGCCCCTAAAATGGGGGTTAATATTCAACGTGTTTCGTTTGGTGCTAAAAAAATCAAGCTAACTGTTAGTTTAGCAACTAGAGACCTTAATGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATAGCGGTATGTTTCACCATGTAAGAGAGCAAGCGGCTAGAGTACTGCACACTGAAACACCTGTAGAGTTGAAACTACCAGATGAGCCAGATAGGTACTATTTAGCGATAGTAAAGGGTGATGTTACTTTGAAAGGCATCTCTGACTGGTATGACCAGACTGAAATAGAATTTTTTGTGCCTGACGGTGTCGCACATTCGACTACCTATCGCAGTTTTGAAACCCCTAAAATAGAGGACAACAAGATGGTATTTGACCTTGTTAACGATGGATCAGTTAATGCTAACCCAATAATTACAGTGAAGCACAACAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGATAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCGTCAAACGGAGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAACATTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGAAGTCTTTACATCGACAATGCTTGGGGTCGTCCTCACATTGCGTTGCAGAGCGGTCAAGTAGCATCGGTTAGTTTCGACATCCCAAGGGATTCCACCGGTGAAAAGGGCGCTCTGTATGAATATTTCTGGTGGAGGCAAATTTTCTGGTTAGGGTCTGCGAATCAGATGGGCTATTTAAAAATTTGTGTCACAGACGCAAGTGGTACATTTTTGTATGGTGTTGAAACTTATAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGGTGACGGCAAGGGAGGTTTCCGTATTGTCGACAGAAAGAATTTTCTAGGAACACATATCGAGCAGCACAACCCATTTAATGAACCTAGGGGATGGTCAGATATTATGCGGTTTGATGATGTCGTTCAATACTACTGGTGGGGTTCATACCCAAGATATTCTATTCCTGAAATAAAGGGTAAAAAATCAGACAAAATCCATTTCATTTTTGGTAAGGTCGGCAACGCACCACTTGTTACACACATGTATTTAGATGATTTCATTTATCGAAAAGACTACGTTTTTGGTGTCAGGGATATCCCTAATAGATACCGCGCTGGTGGGAAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTTCTCACGATTCCACCGGGAAAATCACAATTAGAAGTCTACTGTTCAAGCTGGGTAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGATATCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ceab592d0da034a3a5c1771ab84ed55343c5601238ec83868a8bf3b3d8ee87a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank