Protein

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Genbank accession
CAM0035698.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSSINIPGFGYSAVPESPNDDQLYGRRNATWELISLSDGVLEAPTDGKQYVRQDLQWVEPTYPTIFADDVSYDTTTIDQPGPISVQSAIEQVFDKYPLMMIFVKSENDLPTPQVINGVSTHVLGEFEYIIDGDVEISSALGFPGAGISATLRAANRSVLTYTGTDAMFHDLNAQGNIEIAGQTEFQAPNGDMFNLISGAGGFSFQSAKADRFTNCDRLGEVYCGGLSTFVFNNGTFRNFNQGLIVHDPGFFEVNTFFVFGNNQVGCTYFTVEGTSSSGSVNMDTITFSLGTNETIFDLNQNIQDTIDTINVRSCTLRGQLNGTIFAPGSLTQRDHKFESYGNTLIGNTVHGGLIYLSSNTTPTVGAINTPVKAEGVWATAEKSHFDDSVNGRMSSRVIRTISSSVDLSVTVRPQTGNGVVIRCYLAKNGVPIAGSGKTTTADSGKGGNLSISWHVSISENDYFELFVENLSSSTPIIVSDAALRIQ
Physico‐chemical
properties
protein length:486 AA
molecular weight: 52416,51520 Da
isoelectric point:4,52412
aromaticity:0,09671
hydropathy:-0,13230

Domains

Domains [InterPro]
G3DSA:6.20.230.10
ATT
13–35
G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0529
STR
56–486
DC_0529
CAM0035698.1
1 486
Architecture
ATT
ATT
STR
ATT 13-35 | ATT 39-61 | STR 62-486
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0035698.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 122 122 0,7956
Central domain 123 347 226 0,9641
C-terminal 348 486 138 0,9834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-122
Central
123-347
C-terminal
348-486

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage F86
[NCBI] 		3105356 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0035698.1 [NCBI]
Genbank nucleotide accession
OZ196285.1 [NCBI]
CDS location
range 11417 -> 12877
strand +
CDS
ATGTCAAGTATTAATATACCCGGCTTTGGGTATTCCGCTGTACCTGAATCACCAAACGACGATCAGCTATACGGGAGACGAAACGCCACATGGGAGCTGATTTCTCTATCAGATGGAGTGCTAGAAGCCCCTACTGACGGTAAGCAATATGTGCGTCAAGATTTGCAATGGGTCGAACCGACATACCCGACGATTTTTGCCGATGATGTTTCGTATGACACGACCACGATTGATCAGCCCGGTCCCATTAGCGTACAGTCGGCAATAGAGCAGGTATTCGATAAATACCCACTAATGATGATTTTCGTCAAATCTGAAAATGATTTACCTACCCCTCAAGTAATTAACGGCGTATCGACTCATGTCTTAGGAGAGTTTGAGTACATCATTGATGGCGATGTTGAGATATCATCTGCGCTAGGATTCCCAGGCGCGGGTATTAGCGCAACTCTGCGTGCTGCAAATCGTTCAGTTCTGACGTATACAGGAACAGATGCAATGTTTCATGATTTGAATGCTCAGGGAAACATTGAAATAGCAGGCCAGACTGAATTTCAGGCTCCGAATGGTGATATGTTTAACTTGATTTCAGGTGCAGGTGGGTTTTCATTTCAATCGGCAAAAGCTGATAGATTTACAAACTGTGACCGTTTAGGTGAAGTTTACTGTGGTGGGTTATCTACATTCGTATTCAATAACGGAACGTTTAGAAACTTCAATCAGGGATTGATTGTTCATGACCCTGGTTTTTTCGAAGTCAATACGTTTTTTGTATTTGGTAATAATCAGGTTGGTTGTACGTATTTCACGGTTGAAGGTACCTCATCGTCTGGGTCAGTCAACATGGACACGATCACATTCTCGCTCGGAACGAATGAGACTATTTTTGACTTGAATCAGAACATACAAGACACGATTGATACGATAAATGTGAGGAGCTGTACTCTTCGAGGTCAATTAAACGGGACGATATTTGCACCGGGAAGTCTAACTCAGCGAGACCATAAGTTTGAGAGTTATGGTAACACTCTGATCGGAAATACTGTTCATGGTGGGTTGATATACCTGAGTTCAAACACTACTCCTACTGTAGGAGCAATAAACACGCCAGTTAAAGCGGAGGGTGTTTGGGCTACGGCTGAGAAATCTCATTTTGATGATAGTGTCAATGGTCGAATGTCGTCTCGTGTTATAAGAACAATATCATCGAGTGTTGATCTGTCTGTTACCGTTCGTCCACAAACAGGCAACGGGGTTGTTATTCGTTGCTATCTAGCCAAGAATGGCGTGCCTATTGCCGGTAGTGGTAAAACTACAACTGCTGATAGCGGAAAGGGTGGCAACTTGTCTATATCATGGCACGTTTCTATTTCAGAAAATGACTATTTTGAATTGTTCGTTGAAAATTTGAGTAGTTCGACACCTATCATTGTTTCGGATGCAGCGTTGCGCATTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
480a86aa57957645acda26e30ec3e0aabef71019b0ae61ecbe949903a3994c6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50