Protein

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Genbank accession
QBJ00804.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALFKQTIYQNKVNEINKAGKHLKVINSQTELDIRVFNLVGELILSTKVRAGFEITLPVFAKVVISAEQEQKIEMWVDENPLGYNAPTANANDLKSFKGLHYGDSEEILPFEPSRLSAKIVSDSPWWYGGSNVDSENGIPVAAGEVAEIRGAAKISAAISAKAEYLTTTQTSDTGARPWIYGSFSNAHGVVIQNNSGGIDLLNKSGLQSVPTQGVSVYVMAKISKHVIAYAAATSDYIYLYNMETKKVELLSIPTTTGDAVEGKYITRISSIAYTGGRYVINASVYDMVAGKDIKALVVSDDSGWLFKYVMPSNSGHYPGDLYPISDSGLLILHSDKVYCVDVNAIPDDRVYDGAFTNLNLISTGFSGDVGYLSVVSYGGYTLLKSQSTNSEAVLIKESDFTAVNIGRCQIALLSEVGLIKGNGSDWLLSKDFGQTYTPIEPALSFSSSSNVHADFYDGVVIIASTSLTGYILTEKQRQNAKQNFRILKAYS
Physico‐chemical
properties
protein length:492 AA
molecular weight: 53386,65810 Da
isoelectric point:5,40047
aromaticity:0,09756
hydropathy:-0,04898

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ00804.1
1 492
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,1406
Central domain 312 481 171 0,4817
C-terminal 482 492 10 0,9489
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-481
C-terminal
482-492

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage GXT1010
[NCBI] 		2510463 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ00804.1 [NCBI]
Genbank nucleotide accession
MK424903 [NCBI]
CDS location
range 668 -> 2146
strand +
CDS
ATGGCGTTATTTAAACAAACAATTTACCAAAATAAGGTGAATGAAATAAACAAAGCGGGCAAGCATTTAAAAGTAATTAATTCGCAAACAGAATTAGATATTCGCGTTTTTAATTTGGTTGGTGAATTGATTTTAAGTACAAAGGTTCGCGCAGGGTTTGAGATAACCTTACCAGTGTTTGCAAAAGTTGTTATTTCAGCAGAGCAAGAGCAAAAAATTGAAATGTGGGTCGATGAAAACCCGCTAGGCTATAACGCACCAACGGCCAACGCAAACGACTTGAAATCCTTCAAGGGGTTGCATTACGGTGATTCGGAAGAAATATTGCCTTTTGAGCCCTCAAGATTAAGCGCAAAAATAGTTAGCGATTCGCCTTGGTGGTATGGCGGCTCAAACGTTGACAGCGAAAACGGGATACCCGTTGCAGCGGGTGAAGTTGCAGAGATACGCGGCGCGGCAAAGATTAGCGCCGCAATTAGCGCAAAAGCAGAGTATTTAACAACTACACAAACGAGTGATACAGGCGCAAGGCCATGGATTTATGGTTCTTTTTCAAATGCTCACGGTGTAGTTATACAAAACAACAGCGGCGGTATTGACTTGCTAAATAAAAGTGGTTTGCAGTCAGTACCAACGCAAGGCGTTAGCGTTTATGTAATGGCTAAAATTAGCAAGCACGTTATAGCCTACGCAGCAGCAACAAGCGATTATATTTACTTATACAACATGGAAACCAAAAAAGTTGAGTTGTTAAGCATCCCAACAACAACAGGCGATGCGGTAGAGGGCAAATACATAACTCGAATTAGTTCAATTGCATACACTGGCGGGCGCTATGTAATAAACGCAAGTGTTTACGATATGGTTGCAGGAAAAGATATTAAAGCGCTAGTAGTATCGGATGATAGTGGGTGGCTTTTTAAATATGTTATGCCGTCAAACAGCGGTCATTACCCTGGTGATTTGTACCCCATTTCAGATAGCGGGCTGTTAATTTTACACTCTGATAAGGTTTATTGTGTAGATGTTAACGCTATACCAGACGACCGTGTTTATGATGGCGCATTTACCAATCTTAATTTAATAAGTACGGGCTTTTCAGGGGATGTCGGTTACCTGTCAGTTGTTAGTTATGGCGGTTATACACTTTTAAAAAGCCAATCAACCAACAGTGAAGCGGTTTTAATTAAAGAGTCAGATTTTACAGCGGTAAATATTGGCCGCTGTCAGATTGCATTGCTTTCTGAGGTGGGTTTAATAAAAGGAAATGGCAGCGATTGGTTATTATCTAAAGATTTTGGGCAAACATACACGCCAATAGAACCAGCGCTTAGCTTTTCAAGTAGTTCAAACGTTCACGCGGATTTTTATGACGGCGTTGTTATTATCGCGTCAACAAGTTTGACAGGTTACATATTGACAGAGAAACAGCGTCAAAATGCAAAGCAAAACTTTAGAATTTTAAAGGCGTATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81de6349336a588ed1a5dd965df281fe1d21b8e610ab55b310791adde1326014
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Pseudoalteromonas Phage GXT1010 from the Yellow Sea Xue,C. 2016-12-09 — GenBank