Protein

View in Explore
Genbank accession
YAS74893.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MAAGTLSVTNNSKAVVGVGTTFTAFKAGDFLSLVVGQVPYTVAISSVESDTALTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMLADENNWRAIFGDEEEIAVTLPNGQVMQGMSWGYLSQLLKEVDPVEMRNLQQQAAASEAAALVSRNEAEGFKNDANTIKTQTDQIKADTQAIHDATNTIKTQTDQIKADTQAIKDQTNQIKTETGVIRDEANTAKTDAQAASAAAQGFRDQAEEWAQSVNADNLLTKSSNLAGLTDKSEARSNLDLGSVATENTVPIEKGGTAATTAAEARSNFGLGSVATENTVPIEKGGTAATTVAAARTNFGLGDNNNVKLGTLRLNGGESLVFNDVERNGLIISNASFGIDSWVGQTMHKWYTDWTRAGLVRAGDTHLSDYRVHVWKDGFTESLFRFLPDGRLISGNSVNPSVNEFQKAPLSDRDLKKEIKYTDGEESYNRVRQWLPAMFKYKESDVQRYGLIAQDLARIDPEYVHLLPGYAIYEDVKGVDEEGNEVVVDRKEIGYTDDVLSLDSNVLLMDLCAAFVHLLHKVEKLEGK
Physico‐chemical
properties
protein length:568 AA
molecular weight: 61545,90260 Da
isoelectric point:4,80224
aromaticity:0,06690
hydropathy:-0,32606

Domains

Domains [InterPro]
DC_0162
STR
1–568
DC_0162
IPR030392
CHP
451–568
IPR030392
IPR030392
CHP
451–504
IPR030392
YAS74893.1
1 568
Architecture
STR
STR 1-568
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_P78
[NCBI] 		3466734 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS74893.1 [NCBI]
Genbank nucleotide accession
PX063913.1 [NCBI]
CDS location
range 1 -> 1707
strand +
CDS
ATGGCAGCGGGTACACTATCCGTAACGAATAACAGCAAGGCGGTTGTCGGGGTAGGCACGACGTTTACCGCGTTTAAAGCAGGCGACTTCTTATCGCTGGTAGTGGGGCAAGTTCCTTACACTGTTGCGATCTCGTCCGTAGAAAGCGACACCGCGCTTACGCTTGTGCTGCCGTTCGACGGACCAACGGCAACTGGCCTCGCGTGGGATGGCGTTAAGCGCGATACCATGTCGCTGGCAACGATGGGCGTAACCGTCCAGGCCCAGAAAGCGTTGCGCTTGATGCTCGCGGACGAAAATAACTGGCGCGCAATCTTCGGAGACGAGGAAGAAATCGCGGTAACGCTGCCGAACGGGCAAGTTATGCAGGGTATGTCATGGGGCTATCTGTCGCAATTGCTGAAGGAAGTTGACCCTGTTGAGATGCGCAACCTGCAACAACAAGCCGCCGCATCTGAAGCCGCCGCGCTGGTATCGCGTAATGAAGCAGAAGGCTTCAAGAACGACGCCAATACCATCAAGACGCAGACCGACCAAATCAAGGCCGATACGCAGGCGATCCACGACGCCACCAACACCATCAAGACGCAGACGGATCAGATTAAGGCGGATACGCAGGCCATCAAGGACCAGACGAACCAGATTAAGACTGAAACCGGCGTTATTCGCGACGAAGCTAATACGGCGAAGACTGACGCGCAGGCCGCCAGCGCTGCCGCGCAGGGATTTCGCGATCAGGCCGAAGAATGGGCACAAAGCGTAAACGCCGATAATCTGCTAACCAAATCCAGCAACCTGGCGGGGCTAACTGATAAATCGGAGGCGCGCTCTAATCTTGATTTGGGGTCTGTTGCCACTGAAAACACCGTCCCTATCGAAAAAGGCGGCACTGCGGCAACAACGGCAGCGGAGGCGCGCTCTAATTTCGGGTTGGGGTCTGTTGCCACGGAAAACACCGTTCCGATCGAGAAAGGGGGAACCGCCGCGACGACGGTAGCCGCTGCGCGCACTAATTTCGGGTTGGGCGATAACAATAACGTAAAACTTGGCACGTTGCGCCTAAACGGTGGTGAATCGCTAGTCTTCAATGATGTCGAGCGTAACGGTTTGATTATATCCAACGCGTCTTTCGGGATTGATAGCTGGGTTGGGCAGACGATGCATAAGTGGTACACGGATTGGACGCGCGCGGGCCTAGTAAGGGCCGGGGATACCCACTTATCAGACTACCGCGTCCATGTGTGGAAGGACGGCTTTACTGAGTCGCTATTCCGATTCCTACCGGACGGCAGGCTTATTAGTGGTAACAGCGTCAACCCGTCGGTTAACGAGTTCCAGAAAGCGCCGCTATCAGACCGCGACCTTAAAAAAGAAATCAAATACACGGACGGCGAGGAAAGTTACAACCGAGTTCGACAATGGCTTCCGGCGATGTTCAAGTATAAGGAGTCGGACGTACAGCGATACGGCCTTATCGCGCAGGACCTGGCACGGATTGACCCGGAATACGTGCATTTGCTGCCGGGTTACGCCATTTATGAGGACGTCAAGGGGGTGGACGAGGAAGGGAACGAGGTTGTAGTAGATCGGAAGGAGATCGGGTATACCGACGATGTGCTGTCTTTGGATAGTAACGTGCTGTTGATGGATCTGTGTGCCGCCTTCGTCCACCTGTTGCATAAAGTGGAGAAGCTGGAAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c394033a4589455abee91b401ab41dd7e73fe019fd314a09f4cd5d0ee24301d5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of vB_EcoS_P78 lytic bacteriophage against multidrug-resistant Escherichia coli Wen,R. 2025-11 — GenBank