Protein
View in Explore- Genbank accession
- CAH1082826.1 [GenBank]
- Protein name
- major facilitator superfamily protein
- RBP type
-
TSP
- Protein sequence
-
MNTQSNTAFSLLALAIGAFAIGTTEFSPMGLLPNIANDLGISIPTAGMLITGYALGVMLGAPFMTLWFGGFARRNALIFLMAIFTVGNLIAAFSPNYMSLLGARLITSLNHGAFFGIGSVVAASIVPAHKQASAVATMFMGLTIANIGGVPLATWVGQNIGWRMSFLAISVLGIITMLALWKALPQGMVAQKPNVKAELKVLTRTPVVLALLTTVLGAGAMFTLYTYIAPSLTEFTHASPTFITFMLVLIGVGFSIGNHLGGRFADLSINKTLIGFLVLLIVMMVTFPILAQSQIGAAIALVIWGAATFALVPPLQMRVMSVAHEAPGLASSVNIGAFNLGNAVGAAAGALVLDLGWGYSAVSFAGALLAGLGLLLVLFQIKRESSPAQTLQQCSD
- Physico‐chemical
properties -
protein length: 396 AA molecular weight: 41163,53740 Da isoelectric point: 9,71863 aromaticity: 0,09091 hydropathy: 0,96414
Domains
Domains [InterPro]
IPR036259
STR
5–202
STR
5–202
IPR050189
Unmapped
6–388
Unmapped
6–388
IPR036259
STR
8–383
STR
8–383
IPR020846
STR
10–385
STR
10–385
cd17324
STR
11–342
STR
11–342
IPR011701
STR
14–333
STR
14–333
1
396
Architecture
STR 5-392 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
396
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 179 | 179 | 0,1575 |
| Central domain | 180 | 378 | 200 | 0,1638 |
| C-terminal | 379 | 396 | 17 | 0,9935 |
Note: Constraints were applied during segmentation.
Fixed 155 C-terminal predictions appearing before Central domain
Fixed 155 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-179
1-179
Central
180-378
180-378
C-terminal
379-396
379-396
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1082826.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000008
[NCBI]
CDS location
range 107026 -> 108216
strand +
strand +
CDS
ATGAACACTCAATCAAATACGGCGTTCTCGTTATTGGCATTGGCAATTGGTGCCTTTGCCATTGGCACCACGGAATTTTCCCCAATGGGGTTACTTCCGAACATCGCTAATGATTTAGGGATTTCAATTCCAACAGCCGGTATGTTAATTACAGGCTATGCACTTGGCGTAATGCTAGGTGCACCGTTTATGACCCTGTGGTTTGGTGGTTTTGCACGACGTAATGCGCTTATTTTTTTGATGGCGATCTTTACGGTCGGTAACCTGATTGCAGCGTTTTCACCAAATTATATGAGCTTATTAGGTGCACGTCTCATTACAAGCCTGAACCACGGTGCCTTTTTCGGGATTGGTTCTGTTGTGGCAGCGAGTATTGTACCAGCGCATAAACAGGCTAGTGCTGTGGCAACCATGTTTATGGGCTTAACCATTGCCAATATTGGTGGTGTGCCTTTAGCAACATGGGTTGGGCAAAACATTGGCTGGCGTATGTCTTTCCTTGCGATTTCCGTGCTCGGCATCATTACTATGCTCGCTTTGTGGAAAGCATTACCGCAAGGTATGGTTGCCCAAAAACCAAACGTGAAGGCCGAGTTAAAAGTATTAACGCGTACCCCTGTGGTTCTTGCATTACTCACTACCGTACTCGGTGCAGGTGCAATGTTTACGCTCTACACCTATATTGCGCCAAGTTTGACTGAGTTTACCCATGCTTCACCGACCTTCATTACGTTCATGTTGGTGTTGATTGGTGTCGGTTTCTCGATTGGTAACCATTTAGGCGGCCGTTTTGCAGACTTGTCCATCAACAAAACTCTGATTGGTTTCTTGGTACTGTTGATTGTGATGATGGTGACTTTCCCAATTCTTGCTCAAAGCCAGATTGGAGCAGCCATTGCGTTGGTGATATGGGGTGCAGCAACCTTTGCTTTAGTACCGCCATTACAAATGCGTGTCATGTCAGTCGCTCATGAAGCTCCAGGGCTTGCCTCTTCAGTAAATATCGGTGCGTTTAACCTAGGTAATGCAGTAGGTGCCGCTGCAGGCGCGTTAGTACTCGATTTAGGTTGGGGTTATAGTGCAGTATCTTTTGCGGGTGCCTTACTGGCGGGATTAGGTTTGTTATTGGTTTTATTCCAAATCAAACGAGAAAGCAGCCCCGCTCAAACCTTACAACAGTGTTCAGACTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
b25258fb4828be75221c2cf4c7acfaf82f7c4d35bb02eb1cf5fa8ae21cee3c85
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50