Protein

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Genbank accession
YAS74971.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MVTKTVIPTDITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAATKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGVIEDSVWLADKFQRGKYSSGDGTTTFRVPDKNGVQEGSIRALYGRGDGGNSGANGQLFESAAPNITGFFTTYASQTYGQVLGQTGGCFNANNNAFPDGRGDGIPPGSTALSGRYNTCDFNASISSPIYGASTDEILTRNFVGVWVIRASGGFVAANTSWSVINADKTTPNSGVVVFGGSVKSEYKSPGANVTAELKSSKVINGAWGVSLTITDDRGIPVSIKYDSNGQFSTSHRPSGVGTGSSYTHCAYRAPDWWNNTAYSAFVPILGGGSGNSLKNYRSFACFGQISYPDSSNSYPRAAIAQVRDWALPDGEQGNGKSITVFTFIDNSFDLQYGYNDGSLNYIFSKSPICDERLKKNIESIDTNIAISNIKQMLYKSYIYKNDENEQVRRGFIAQDLQKIDPQYVREYGDPGREKTLAIDENVMLLDSVAAVKWLINKVEELQEEINVLKAK
Physico‐chemical
properties
protein length:576 AA
molecular weight: 62643,78530 Da
isoelectric point:5,42229
aromaticity:0,10417
hydropathy:-0,40764

Domains

Domains [InterPro]
Coil
Unmapped
11–31
Coil DC_2049 DC_0203
DC_1514
STR
13–181
DC_1514 IPR030392 Coil
IPR030392
CHP
475–570
IPR030392
YAS74971.1
1 576
Architecture
STR
RBD
STR 13-388 | RBD 440-576
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAS74971.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 292 292 0,3185
Central domain 293 491 200 0,1816
C-terminal 492 576 84 0,9953
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-292
Central
293-491
C-terminal
492-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-TPF103dw
[NCBI] 		3458632 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS74971.1 [NCBI]
Genbank nucleotide accession
PX092659.1 [NCBI]
CDS location
range 23766 -> 25496
strand +
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAAATGAGTCACTTAACAAGAATAATAATTTAAGTGACTTAGCAGACCGTGCAGCAGCATGGTTAAATGTGCGTCCTATTGGGTCCACCCCTCTTGCGGGGGATCCTGTTGGGGACTATGATGCCGCAACTAAACGTTGGGTAGAGAATAAGATTAACACTGGTACAGTCGGTCCTACTATGAACGGCGTTATGAATTACGGGGTTGGTGATTTCCACCTTCGAGATAGTCGTGCGTATATCCAACCGTACGAAGTGGTTTCTGACGGTCAATTACTGAATCGTGCAGACTGGCCTGAACTCTGGGCATACGCTCAAATGGTTGGTGTTATAGAGGATTCCGTATGGTTAGCGGATAAATTTCAGCGTGGTAAGTACTCATCTGGGGATGGGACAACAACCTTTCGTGTTCCAGATAAGAATGGGGTGCAGGAGGGATCAATACGTGCTCTTTATGGCCGTGGAGATGGTGGGAATAGTGGTGCAAATGGGCAACTGTTCGAATCCGCTGCGCCTAATATTACAGGTTTTTTCACCACTTATGCCTCTCAAACCTACGGCCAAGTATTAGGTCAAACAGGTGGTTGTTTTAATGCAAACAATAATGCTTTCCCTGACGGAAGAGGTGACGGAATCCCACCAGGAAGTACAGCTCTTTCTGGACGTTATAACACCTGTGACTTCAATGCTTCAATTTCAAGTCCGATTTATGGCGCATCCACTGATGAAATCCTTACGCGCAACTTTGTCGGTGTGTGGGTAATCCGCGCGTCGGGGGGATTCGTTGCTGCAAATACATCATGGAGTGTTATTAACGCTGATAAAACAACTCCCAATTCAGGTGTTGTTGTTTTTGGTGGCAGTGTTAAATCTGAATATAAATCACCCGGTGCAAATGTAACAGCGGAACTAAAATCAAGTAAAGTAATTAATGGCGCATGGGGTGTTAGCTTAACTATAACAGATGATAGAGGGATCCCTGTAAGCATTAAGTATGACAGTAATGGTCAGTTTTCAACATCTCATAGGCCATCTGGAGTCGGTACTGGGAGTTCCTATACTCATTGCGCTTATCGCGCGCCAGACTGGTGGAATAACACAGCATATAGTGCCTTCGTACCAATTCTTGGAGGTGGTAGCGGTAACTCACTAAAGAACTATAGATCTTTTGCTTGTTTTGGACAAATATCTTATCCTGATTCTAGTAATAGTTATCCTAGAGCTGCAATTGCTCAAGTAAGGGATTGGGCACTACCAGATGGTGAACAAGGTAACGGCAAGAGTATTACCGTGTTTACGTTTATTGATAATTCATTTGACCTTCAATATGGGTACAACGATGGTTCGCTAAACTATATTTTTTCAAAATCTCCAATTTGTGATGAAAGATTAAAGAAAAATATTGAATCCATTGATACTAATATTGCAATAAGTAATATTAAGCAGATGTTATATAAATCATACATCTATAAAAATGACGAGAATGAACAGGTGCGCCGTGGTTTTATAGCTCAGGATTTACAGAAAATAGATCCCCAATATGTGCGGGAATATGGAGATCCTGGAAGAGAGAAAACGTTGGCCATTGATGAAAACGTTATGTTGCTTGATTCAGTTGCTGCGGTTAAGTGGCTTATTAATAAAGTTGAGGAGTTGCAAGAAGAAATAAATGTATTGAAAGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
554142d13ed60c2593e7e1e44482276535e1638567702fbff5f724ae4da212ab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7471
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50