Protein

View in Explore
Genbank accession
WKW88897.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MANINKISMNLIWGVSGDITAPGPEKMNKGWEVEVVPRQWLNYLQNRLDTNVAYLLQKGLPEWDSETEYQANTSYVQRNGVVYKASRTNTNSEPGTTAGNTNWNRAFQEWSPALESLTSLTPAAWRFPFYNASGAATLGGITSYTVGLMGLSSDVAWRAELKAQASASQLTWLSNLAPVAGAIPYFNTATSMANLATTPFGRTWIGVADAAAGRAQLQLGNAAAMTATATNQANTIVARDSTGTAAIGTVIGSLTGNATSATRLQTGRRINGVVFDGTQDINLPPLTPDYAGVVARLHINGTGMTGSDKTTQLALRNTSDNNWISLAVLDDKTLQFAFRDQTDPSVRIGNNPIFHAGNQFDLGPSRNSAKENLGLDRFSQSSTDSNVFSSLGANGPYLVAQPSAVGGFNNATGAWMFRFDQSGTMTHGTVPVARVSGLANSAQIPAVTTAQSNSLVQRDASGSFSATGINAYGTIIGYGSNIFSRSSGTGNAHIGFQKADGSELGLIWGAPSNGSMNFRTLGGSTGMTLTGQDLTVVGRVNAATLNASGNVNATGNVNAGQATLNTAGNITGAAYGSYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTIRAGSQLKPHSTISYTAGALPAAGQYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:673 AA
molecular weight: 70072,80380 Da
isoelectric point:8,75012
aromaticity:0,08024
hydropathy:-0,19272

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKW88897.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 347 347 0,4535
Central domain 348 546 200 0,1219
C-terminal 547 673 126 0,9123
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-347
Central
348-546
C-terminal
547-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LSL4
[NCBI] 		3061297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKW88897.1 [NCBI]
Genbank nucleotide accession
OQ970155.1 [NCBI]
CDS location
range 29108 -> 31129
strand +
CDS
ATGGCCAACATCAACAAGATCAGTATGAACCTGATTTGGGGCGTTTCTGGTGATATCACCGCCCCAGGTCCGGAAAAGATGAACAAAGGCTGGGAGGTAGAGGTAGTCCCCCGGCAGTGGTTGAACTACCTGCAAAACCGCCTGGACACTAACGTAGCATACCTGCTTCAGAAAGGCCTTCCAGAGTGGGACAGTGAGACCGAGTACCAGGCAAATACCTCCTACGTGCAACGCAACGGTGTAGTGTACAAGGCCTCTCGGACGAACACCAACAGCGAGCCTGGCACGACTGCTGGGAACACCAACTGGAACCGGGCGTTTCAAGAGTGGTCCCCGGCGTTGGAGTCGTTGACTTCCCTGACACCGGCTGCTTGGCGGTTTCCGTTCTACAACGCCTCGGGCGCGGCAACCCTGGGAGGAATTACCTCCTATACTGTAGGACTCATGGGCCTTAGCTCGGACGTGGCGTGGAGGGCAGAGCTGAAGGCTCAAGCGAGTGCCTCTCAGCTCACTTGGCTGTCCAACTTGGCGCCTGTGGCAGGAGCTATCCCGTACTTCAATACGGCCACCTCCATGGCCAACCTGGCGACTACTCCTTTTGGACGTACCTGGATTGGTGTTGCGGACGCGGCAGCAGGACGGGCGCAACTACAGTTGGGTAATGCCGCAGCTATGACGGCTACGGCCACCAACCAGGCCAACACGATTGTTGCCCGAGATTCTACGGGAACTGCTGCCATTGGTACGGTGATCGGAAGCTTGACGGGGAACGCAACCTCTGCAACCCGTTTGCAGACGGGGCGGAGGATTAATGGGGTTGTTTTCGATGGCACCCAGGATATCAACCTACCACCTCTGACTCCAGATTACGCAGGGGTGGTGGCGAGGCTTCACATCAACGGAACCGGAATGACGGGGAGTGATAAGACTACCCAACTGGCGTTGAGAAACACCTCAGACAACAACTGGATCAGCCTAGCTGTATTAGACGATAAAACTCTCCAGTTTGCGTTCAGGGATCAAACTGATCCATCCGTAAGGATTGGAAATAACCCGATCTTCCACGCGGGTAACCAGTTTGACCTGGGACCTTCTAGAAACTCGGCGAAAGAGAACCTGGGGCTTGACCGATTCTCCCAGAGTTCTACTGATTCTAACGTGTTTTCTAGTCTGGGGGCTAATGGTCCCTACCTTGTGGCTCAACCTTCGGCAGTTGGAGGATTCAACAACGCCACAGGGGCATGGATGTTCCGGTTTGACCAGTCCGGGACGATGACCCACGGTACCGTACCGGTTGCGAGGGTATCGGGGCTGGCCAACTCGGCTCAAATCCCCGCTGTAACCACTGCCCAGTCTAACTCCCTGGTTCAGAGGGATGCAAGCGGCAGCTTCAGCGCAACAGGTATCAATGCCTACGGGACCATCATCGGTTACGGCTCTAACATCTTCAGCCGCTCTTCTGGAACAGGGAATGCCCACATCGGCTTCCAGAAAGCTGACGGAAGTGAGTTGGGCCTTATCTGGGGTGCCCCGTCTAACGGGTCCATGAACTTCCGGACGCTGGGTGGCTCGACAGGTATGACTCTTACAGGTCAAGACTTGACTGTAGTTGGAAGGGTCAACGCAGCCACGCTGAACGCCTCCGGTAACGTGAATGCTACAGGGAACGTTAACGCAGGACAGGCTACGCTCAATACCGCAGGGAACATCACGGGAGCCGCTTACGGCTCGTATGGCTCTCTGACCAACTGGGTGGATTCGGTATATGCCAAGAAGGGTGAGATTCCTAACGACATTGCCCGAGCTGGAGCAGCCTGGGACGCCGTAGGTCAGTACATCCTGGCAGGAGACCAGTCAGGCGGGTCGGGAGGCCCTGGCACCATTAGGGCAGGGAGCCAACTGAAACCGCACTCTACCATCAGTTACACCGCAGGGGCACTTCCGGCAGCCGGGCAGTACCGTTGCATGGGAGCGTTTGCAGGGGGTGGTAACCAGATCACCCTGTGGCAACGCATTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab8f7acd77774d10922b80fb1e23baf2e892bd8ec6fadcdc046109a5f4201dd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6586
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50