Protein

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Genbank accession
UPW42049.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRLELNRYRKSVKGNFIYGCLSLLGEDGKELFQCSCLENLSKSIPVGKYTVKNLYSPKFDRMMLRLVDVPDRSGILIHQGNYAKDSRGCILVGFKPIGIQDPHFLVSSSKALTGLYKELGLLSHPMRCITLTITINNLINI
Physico‐chemical
properties
protein length:141 AA
molecular weight: 15865,55110 Da
isoelectric point:9,39951
aromaticity:0,07801
hydropathy:0,00071

Domains

Domains [InterPro]
IPR043732
STR
27–119
IPR043732
UPW42049.1
1 141
Architecture
STR
STR 27-119 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dipodfec virus RodF1_11
[NCBI] 		2929288 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW42049.1 [NCBI]
Genbank nucleotide accession
OM869715.1 [NCBI]
CDS location
range 3955 -> 4380
strand +
CDS
ATGAGATTAGAATTGAATAGATACAGAAAGTCAGTGAAAGGCAACTTCATCTACGGTTGTCTTTCACTTCTTGGAGAAGACGGTAAAGAGCTTTTCCAGTGTTCTTGTCTTGAGAATCTTTCTAAGTCCATCCCGGTTGGAAAGTATACTGTAAAGAACCTTTACAGTCCAAAGTTTGACCGAATGATGCTGCGCCTTGTTGATGTGCCGGACCGTAGCGGCATACTGATTCATCAGGGCAATTATGCTAAAGACTCTCGTGGTTGTATTCTTGTCGGGTTCAAACCGATTGGAATACAAGATCCACACTTCCTTGTTAGTTCCTCTAAGGCTCTTACAGGCCTTTATAAGGAACTGGGGTTGCTCTCCCACCCCATGCGCTGTATAACTTTAACAATTACAATTAATAACTTAATTAACATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
20e1f38dc5dea0a41e871c1ff0fce8e8dcfb3e4211c0de9794e3985b425d587b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Towards deciphering the DNA virus diversity associated with rodent species in the families Cricetidae and Heteromyidae Lund,M., Larsen,B.B., Gryseels,S., Kraberger,S., Rowsey,D.M., Steger,L., Yule,K.M., Upham,N.S., Worobey,M., Van Doorslaer,K. and Varsani,A. — — GenBank