Protein

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Genbank accession
AUS01939.1 [GenBank]
Protein name
coil containing protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIRITIVEDTALGVDNIGVGVTVPRKAKIAVVSGFSVVSSIRTFDALNDTPTTKQANSFVVSDTNANELIYVKPKLTQGTGIKITNPFILDDPTIEVDIAGTAEETVVDPSDSLLIETSGGKKKMSRQNFLDGMVYSVFTRTGNVTAAAGDYSSNLISHTPSGSIIATNVDTAIQELDGGIITINGDIVAINNNITNITDGTTPVGDANKLGGSLASKYLQRDIQESISSRYSFTNTDSIKIPVGTEAQRGVEEAGSFRLNSETKKAELYNGDEWVGVGGGGGASEYKIHNSGTSLAIGRGESYMVDTTTIASDVTVNLPLNASGLKFGDWISIGFYADATNDIIVHSDEHPIMGVVGDYTLSSNDSVYTFSYVDATQGWKIVNSVGGVKADEVFYDNTDSGLTADSVKTAIDEVQSNVDTLDSETAKLVGQNTFTDVQRLTGASPILELNATSDGNLPYISWTDSRWNNSNNNYRLQLNSSNGFMELSSNVTGNSTIPFRVHSDGTIAMSSNGTSTPFIEQHRVGVGYIRQQFEADSIIGWYTSPDGSTWYRPLAVSCVSDTAYTRNLQNTGTFTNYGNRIELQSVDTPRLEFHNPGSVAGMFVQFAQEIQYGDSNGSGGLNHYVMALRNVTREAQFAAAVYAVGGFHTGSDIRLKKDIKPHSFGSAINTIKKLEVKEFRYKTDLPSSEKRIGFIAQEADLVLPEAIRESNANKTSDDESGNFLSVDPMAFIALQTEAIKELANRLEKLEKQLNE
Physico‐chemical
properties
protein length:757 AA
molecular weight: 81580,34430 Da
isoelectric point:4,72317
aromaticity:0,07794
hydropathy:-0,27133

Domains

Domains [InterPro]
DC_0195
STR
2–757
DC_0195
IPR030392
CHP
653–709
IPR030392 Coil
IPR030392
CHP
653–755
IPR030392
AUS01939.1
1 757
Architecture
STR
STR 2-757
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.058.O._10N.286.46.B8
[NCBI] 		1881377 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01939.1 [NCBI]
Genbank nucleotide accession
MG592662 [NCBI]
CDS location
range 18821 -> 21094
strand +
CDS
ATGGCTATAAGAATAACCATAGTTGAAGATACAGCCTTGGGCGTGGACAATATAGGCGTTGGTGTTACCGTACCAAGGAAAGCAAAAATTGCTGTAGTGTCGGGTTTTTCGGTAGTTAGCTCAATCAGAACTTTCGACGCGTTAAACGATACACCAACAACAAAACAAGCAAATTCATTCGTAGTCTCAGACACAAACGCGAATGAACTGATATACGTAAAACCAAAACTAACTCAAGGGACTGGTATAAAAATAACAAATCCGTTCATACTTGATGATCCGACAATTGAGGTGGATATAGCAGGGACTGCGGAAGAAACTGTGGTAGATCCTAGCGACTCGTTATTAATCGAAACGTCCGGTGGCAAGAAAAAAATGTCTCGGCAGAATTTTCTTGATGGTATGGTATATAGTGTGTTTACTAGGACTGGTAATGTTACAGCAGCGGCTGGGGACTACTCATCGAACTTAATTTCGCACACACCAAGCGGTAGTATAATCGCAACCAACGTTGATACAGCAATCCAAGAACTTGATGGTGGAATAATCACTATAAATGGCGATATCGTCGCCATCAATAACAATATAACAAATATAACCGATGGGACCACACCAGTCGGTGATGCTAACAAATTGGGCGGCTCGCTTGCATCAAAATATCTACAACGAGATATACAAGAATCTATCAGTAGCAGATATTCATTCACGAACACAGATAGTATCAAAATCCCTGTGGGTACTGAAGCACAACGAGGCGTAGAAGAAGCAGGTTCTTTTCGTTTAAATTCCGAAACAAAAAAAGCCGAATTGTATAATGGAGATGAGTGGGTTGGTGTTGGTGGAGGTGGTGGCGCATCCGAGTACAAAATACACAACTCGGGCACCTCACTAGCAATCGGTCGCGGTGAAAGTTATATGGTTGATACAACAACCATAGCATCAGATGTTACTGTCAACTTACCACTCAATGCTAGTGGACTGAAGTTTGGTGATTGGATTTCTATTGGGTTCTACGCAGACGCAACAAACGATATAATAGTTCATTCGGATGAGCACCCAATCATGGGAGTTGTTGGGGACTATACATTATCATCGAATGATTCGGTGTATACATTCAGTTATGTTGATGCAACTCAAGGTTGGAAGATAGTTAATTCTGTTGGTGGTGTTAAAGCTGATGAAGTTTTTTATGATAACACCGATTCAGGTCTGACAGCAGATAGTGTAAAAACTGCTATTGATGAAGTTCAATCAAACGTAGATACCCTAGATTCAGAAACCGCTAAACTTGTAGGTCAAAATACGTTTACAGATGTACAGAGACTAACAGGAGCATCACCGATATTAGAACTGAATGCTACTAGTGATGGAAACTTGCCTTACATCTCATGGACAGATTCAAGATGGAACAACAGCAATAACAACTACAGATTGCAATTGAACAGTTCTAACGGGTTTATGGAATTATCAAGCAATGTAACTGGTAATTCAACAATACCATTTAGAGTACACTCAGACGGCACTATAGCAATGTCTAGTAATGGTACGTCTACACCGTTCATAGAACAACACCGTGTGGGTGTAGGCTATATCCGTCAACAGTTTGAAGCGGATAGTATTATTGGTTGGTACACATCACCAGATGGTAGTACGTGGTATAGACCGTTAGCAGTTAGTTGTGTGTCGGATACCGCATATACTCGAAACCTACAAAACACTGGTACTTTTACAAACTACGGTAATCGCATCGAGTTACAGTCCGTGGACACGCCTAGATTAGAGTTCCACAATCCCGGCAGTGTAGCGGGTATGTTTGTTCAGTTTGCTCAGGAAATCCAGTATGGGGACTCTAACGGCTCAGGTGGTTTAAATCATTACGTTATGGCACTACGTAATGTTACCAGAGAGGCACAGTTCGCGGCAGCGGTATATGCGGTTGGTGGCTTTCATACTGGTTCAGACATCAGACTAAAGAAAGATATAAAACCCCATAGTTTCGGTTCGGCAATCAATACAATCAAGAAACTGGAAGTTAAGGAGTTTAGATATAAAACCGATTTGCCATCATCAGAAAAACGTATAGGGTTTATTGCGCAAGAAGCCGATTTGGTGTTACCCGAGGCAATTCGCGAATCTAATGCAAATAAAACGAGCGACGATGAATCGGGTAACTTCTTATCTGTAGATCCGATGGCATTTATTGCACTACAAACCGAGGCAATCAAGGAATTAGCGAATAGACTTGAAAAATTGGAAAAGCAACTAAATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3a28d64b18496355d7d39f72e9ff6bd5595d464fdf4ba32b09c6bf133788526
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank