Protein

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Genbank accession

XTS03741.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MSTPTLPGSTGYGVDIYGTVLYGYSQPKSLSVEPFTATQTDYGRITLTWASPNDNNWNKLRLVRSTDGYPSTPADGTILLDARVDGIRTSYDDASLTQGVIYYYSIFMSQDAPAWDSGTTYIQSAVVFYNGTYWFSLQASNLNHTPSIGSAFWAPTTYFPTWYPAGSVASLAVKNQGYPDRLYDRTPQPYKIIKSDLFSNTTIDNPALASFLSLFGFQLDALKTRYDQILSFNDADLVSADNLEHLGQQFGVSTDYISSPRLRRQRIKNASVNYRLKGTATGIHNAIAAITGWDSEIVVGQNMLLNSDQSAFAHPVYETWNADTNYFINQFVSYNGFNYKNIVASKGAAQAPTGTNSSNTWWQVQTSSIDSTTLLNPSTKGISTWGRYLNSGVTSTLDAVVGIPHPTIASNNTWNALRFAVTNSPVAGLTGVQSIATLSTPAWSSGTNYVKNNYVSYNTFFYKALRNSGPASTIGAVTPGTNDLYWELQASNVGVGRGQFVRDGIPLPRQITWDPVLPFSVGTTVQHMGNLYICLVANTGQSPTGRYASNAYWQYISSAEQAFTTSHYTTRTVSATNVNARSHILWYDDDGNTLFTSTAPTQATFFARFDTDYVDLDGNTDNTTSQAWTATPTDVDLWESTFGQARVNPVTFNALVTKPKYTTLEIADGRANCVIGYTFGIDYEDKVNYNNGVIFRSAGGSANKWLCLRDGLSIIAAGLQVSKATWPRLGDYERIQITLNGSSIVVKKYNRDGTGGLTTLASLTDATYQTNTIHGLIQRYALGS

Physico‐chemical properties

protein length:	784 AA
molecular weight:	85852,03210 Da
isoelectric point:	6,01171
aromaticity:	0,12372
hydropathy:	-0,26849

Domains

Domains [InterPro]

DC_1214
STR
1–464

DC_1214 IPR003610 DC_1794

IPR013783
STR
35–114

IPR013783 IPR006521 IPR003610 IPR003610

IPR003610
CBM
112–156

IPR003610 G3DSA:2.10.10.90

G3DSA:2.10.10.90
STR
441–565

G3DSA:2.10.10.90

XTS03741.1

1 784

Architecture

STR

RBD

STR 1-565 | RBD 566-784

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1214	STR	DC_1214	1	464	Novel HMM	DC_1214	Central	Low	Positional only	45 proteins / 45 hits
IPR013783	STR	IPR013783	35	114	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003610	CBM	DC_0028	112	156	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR006521	STR	DC_0712	224	296	InterPro cluster	Tail protein I	Central	Low	Positional only	25 proteins / 25 hits
IPR003610	CBM	DC_0028	317	364	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	440	489	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	440	560	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	441	565	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	510	556	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
DC_1794	RBD	DC_1794	560	784	Novel HMM	DC_1794	C-terminal	Low	Positional only	4 proteins / 4 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XTS03741.1

1 784

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	369	369	0,8699
Central domain	370	691	323	0,5689
C-terminal	692	784	92	0,9264

Note: Constraints were applied during segmentation.
Fixed 22 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-369

Central
370-691

C-terminal
692-784

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptomyces phage pSt2308 [NCBI]	3420848	Viruses > unclassified bacterial viruses >
Host	Streptomyces turgidiscabies [NCBI]	85558	cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Genbank protein accession

XTS03741.1 [NCBI]

Genbank nucleotide accession

PV588686.1 [NCBI]

CDS location

range 69208 -> 71562
strand +

CDS

ATGAGTACACCAACACTTCCTGGCAGCACTGGCTATGGAGTAGACATCTATGGAACTGTGCTCTACGGATACTCTCAGCCAAAGAGCCTGAGTGTTGAGCCCTTTACTGCTACACAGACGGATTACGGAAGAATCACTCTGACCTGGGCTTCTCCCAATGACAACAACTGGAACAAGTTGCGTCTTGTGAGAAGCACAGACGGATACCCTTCCACTCCTGCTGACGGAACAATCCTTCTTGACGCAAGAGTGGACGGCATCCGTACGTCTTACGATGACGCGTCCTTGACTCAGGGAGTGATCTACTACTACTCCATCTTCATGAGCCAGGATGCTCCTGCGTGGGATTCAGGAACAACGTATATCCAAAGCGCGGTGGTGTTCTACAACGGAACCTATTGGTTCTCCCTACAGGCTTCCAACCTCAACCACACGCCTTCTATCGGCTCTGCCTTCTGGGCTCCTACTACGTACTTTCCTACCTGGTATCCAGCGGGAAGTGTGGCGTCCCTGGCAGTAAAGAATCAAGGCTATCCTGATCGTCTGTACGACAGAACTCCACAGCCTTACAAGATTATCAAGTCGGACTTGTTCTCGAACACAACGATCGACAATCCTGCTCTGGCCAGTTTCCTTTCCCTATTTGGTTTCCAGCTAGACGCACTGAAGACTCGTTATGATCAGATCCTTTCCTTCAATGATGCGGATCTTGTGTCAGCAGACAATCTGGAACACCTGGGACAGCAGTTCGGAGTAAGCACAGACTACATCTCCTCCCCACGTCTCCGTAGACAGAGAATCAAGAATGCTTCTGTCAATTACAGACTAAAGGGAACCGCTACAGGTATTCACAACGCAATTGCTGCGATTACCGGATGGGATTCTGAGATCGTAGTCGGTCAGAATATGCTTCTTAATTCGGACCAGTCTGCATTCGCACATCCTGTGTACGAGACCTGGAATGCCGACACGAACTACTTCATTAATCAGTTCGTTTCCTACAACGGATTCAACTACAAGAACATCGTTGCGTCCAAGGGTGCCGCTCAAGCTCCTACAGGTACGAACTCTTCCAACACCTGGTGGCAGGTTCAGACCAGCAGCATTGACTCAACCACGTTGCTCAACCCTTCTACGAAGGGGATCAGTACGTGGGGACGCTACTTGAACTCTGGGGTAACCTCCACCTTGGATGCAGTTGTGGGAATTCCTCATCCAACCATTGCATCCAATAACACTTGGAATGCTTTGCGCTTTGCGGTGACAAACTCTCCTGTTGCAGGACTGACAGGCGTACAGTCCATTGCTACCCTGAGCACACCAGCATGGTCAAGCGGTACGAACTACGTAAAGAACAACTACGTATCGTACAACACCTTCTTCTACAAGGCTCTGCGTAACTCTGGTCCAGCGTCTACCATTGGTGCTGTGACTCCTGGTACGAATGACTTGTACTGGGAGCTACAAGCTTCCAACGTAGGTGTTGGTCGTGGTCAGTTCGTCCGCGACGGTATTCCTCTTCCTCGCCAGATTACGTGGGACCCTGTCCTTCCGTTCTCGGTGGGTACGACAGTACAGCACATGGGTAACCTGTACATCTGCCTTGTGGCGAACACAGGACAGAGCCCTACAGGCCGTTACGCATCCAACGCTTACTGGCAGTACATCAGTTCTGCGGAGCAGGCGTTTACGACGTCACACTACACCACTCGTACTGTGTCGGCAACCAACGTCAACGCTCGTTCTCACATCCTCTGGTACGACGATGACGGTAACACCTTGTTCACGTCCACGGCCCCTACACAGGCTACGTTCTTCGCTCGTTTCGATACGGACTACGTAGACCTTGACGGGAACACGGACAATACCACAAGTCAAGCATGGACGGCTACCCCTACAGACGTTGATCTGTGGGAAAGCACATTCGGTCAGGCTCGTGTCAATCCAGTGACATTCAATGCCCTGGTGACAAAGCCGAAGTACACCACATTGGAAATTGCTGACGGTAGAGCTAACTGTGTTATCGGATACACATTCGGAATTGACTATGAGGACAAGGTCAACTACAACAACGGTGTGATCTTCCGCAGTGCTGGTGGAAGTGCTAACAAGTGGCTATGTCTCCGAGATGGTCTTTCCATTATTGCGGCAGGACTTCAGGTATCAAAGGCAACATGGCCACGCCTGGGAGATTACGAAAGAATTCAGATCACTCTGAATGGCTCAAGCATTGTCGTGAAGAAGTACAATCGTGATGGCACAGGTGGCCTGACAACACTGGCTTCTCTAACAGATGCCACATATCAGACCAATACTATTCACGGACTAATTCAACGATACGCACTAGGATCATAA

Genome Context

Tertiary structure

PDB ID

3b0dab9f042d41fb66ee46df982e3dc495b86ea1725a49db0be1e607d0d6be1c

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,2912

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence