Protein

View in Explore
Genbank accession
QBJ00794.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MLYNTGTIAINGNTATGTGTNWTAPASQVRAGQTIIVMSNPVQMFQISSVNSATSMTVTPAASPALSGQKYGILVSDNISVDGLAQAMSQLIKEYDENIGAWDTFATTSANQSITVTINGTSVTIPGIGKLAQKGSNGALAVADGGTGATNAADARKNLDLGDSATKNVGTAAGTVAAGNDSRLNTIEGKLGGTVTGSIISTAGNEVGIATGSGGNKAITLGNVGSDGPAENYVNWLSGNYYSGTWRLGAVRGAGTDLARVQMNIFDGVSSGADFRWYPYGAFQSKSHIGPGEGYGGGYQDIVNGYSTNTSFARPNLSTPNDSGFVPFGRWHTYCSGGYHAVTALGSISQGKSNWPSIELVTIGDSGSAGTRIFSFNTVTADISVSGSGGFGGNYIFSKQPNCDIELKHSVKYDDGYQSYENIKKFLPATYVYNDDPLERVRRGVIAQDVMKIDSEYVTLVPAAPKFDGEGNRVDADDTLALDSNVIMLDTVLALNYVIKQLEATQKELQELKQK
Physico‐chemical
properties
protein length:515 AA
molecular weight: 53789,90840 Da
isoelectric point:4,99765
aromaticity:0,08155
hydropathy:-0,20621

Domains

Domains [InterPro]
DC_0162
STR
1–515
DC_0162
IPR030392
CHP
403–458
IPR030392 Coil
QBJ00794.1
1 515
Architecture
STR
STR 1-515
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ00794.1
1 515
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,8968
Central domain 181 379 200 0,1499
C-terminal 380 515 135 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-379
C-terminal
380-515

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PHB10
[NCBI] 		2530035 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ00794.1 [NCBI]
Genbank nucleotide accession
MK524177.1 [NCBI]
CDS location
range 47859 -> 49406
strand -
CDS
ATGCTTTATAACACTGGCACCATCGCCATTAACGGAAACACCGCCACCGGCACGGGCACGAACTGGACGGCACCGGCCAGCCAGGTTCGCGCTGGCCAGACGATTATCGTCATGTCTAACCCGGTTCAGATGTTCCAGATTTCATCCGTGAACAGCGCCACGTCAATGACGGTTACGCCAGCTGCTTCCCCGGCGTTGAGCGGCCAGAAGTATGGAATCCTGGTGTCCGACAATATCTCTGTCGACGGACTGGCACAGGCCATGTCGCAGCTCATCAAAGAGTATGACGAGAATATTGGCGCGTGGGATACGTTCGCCACAACCTCAGCCAATCAGAGCATCACCGTAACCATCAACGGCACCTCCGTAACCATCCCTGGCATCGGTAAACTGGCACAGAAAGGGAGCAACGGTGCGCTTGCTGTCGCAGACGGCGGAACCGGCGCAACGAATGCCGCAGACGCTCGCAAAAACCTCGATTTGGGAGACAGCGCCACCAAAAACGTTGGAACGGCTGCCGGAACCGTGGCGGCCGGGAATGATTCGCGTCTTAACACCATTGAAGGAAAGTTAGGCGGTACTGTTACAGGAAGCATAATCTCAACCGCAGGTAATGAGGTCGGTATCGCTACTGGTAGTGGGGGTAATAAAGCCATTACTTTAGGTAATGTTGGCTCCGATGGTCCGGCCGAGAATTATGTTAACTGGCTTTCTGGTAACTATTATTCGGGCACCTGGCGGCTCGGTGCAGTACGCGGCGCGGGAACTGATTTAGCTCGGGTACAAATGAACATCTTTGACGGTGTAAGCTCCGGTGCTGATTTCCGCTGGTACCCTTATGGTGCGTTTCAGTCTAAAAGTCATATCGGCCCCGGTGAGGGGTACGGTGGCGGTTACCAAGATATTGTTAACGGCTACAGCACGAACACATCGTTTGCACGCCCAAACCTATCAACTCCAAACGATAGTGGATTTGTACCATTTGGCAGGTGGCATACCTATTGCTCAGGGGGGTATCACGCCGTTACCGCTCTTGGATCTATTTCCCAGGGGAAAAGCAACTGGCCATCTATTGAACTTGTAACCATTGGTGATAGCGGATCTGCAGGAACGCGTATTTTCTCGTTTAATACCGTTACCGCGGATATTTCAGTTTCAGGCAGTGGTGGTTTTGGGGGCAATTATATTTTCTCTAAACAACCAAACTGTGATATCGAACTGAAACATAGTGTGAAATACGATGATGGTTATCAGTCATACGAGAATATCAAGAAATTCCTGCCAGCAACTTACGTATACAACGATGACCCTTTGGAGAGAGTTCGCCGAGGTGTTATCGCTCAGGATGTCATGAAGATCGACAGTGAGTACGTAACGTTGGTCCCTGCAGCACCGAAATTTGATGGTGAAGGCAACAGGGTTGATGCTGACGATACGTTAGCGCTGGATAGCAACGTCATCATGCTTGATACCGTGTTGGCACTGAACTACGTCATTAAACAGCTGGAGGCAACACAGAAAGAGCTCCAGGAGCTTAAGCAAAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
35ed2c7d5e496321438352befbfae116f84e56401b020afc61b6efb22477791c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a Novel Temperate Bacteriophage from Gut-Associated Escherichia from Black Soldier Fly Larvae (Hermetia illucens L. [Diptera: Stratiomyidae]) Chen,Y. 2019-06-20 — GenBank