Protein

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Genbank accession
AZF88929.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MSIRLTGILVDGLNNPLVNTTVTLIARSNTLLVLGSSEAVFRTDAQGAYNITVNPGHYVVIVGPQGKEPYKAGEIVLYADSPEGSLNGYLVNWVEEELTPDVIKQVQQLVANSEEYALQAGRSAAAANADATDARNSKASAAQSASDALVYKNDAKASEDAARQAQAGAAGSANTASQAVTTIQGLKSEVEQLKVDTQTIKDSAVSETQAIKNSAVTETQAIKDAAVSETTALKDAAAASATQASNSATEAGQQASNAGTSATAAKNDADRAKVEADRAEVAANRAPDLQPFPDVWIPFNDSLDMLAGYSPGYKKITVGEDVITMPSDKVVNFSRASNATYINKHGEFCIANIDEPRFEKQGLLIEGQRTNHITFSNDPASLNTDRHRSDVTYGVDKYGFTYITATVNQNGQGDTPSLFYCEYNNSIYCQQNEYATLSIRVKANNISIIPQFYALGEDNALILVARSILSCDTGEVTSTLEARGTVTHRITKEDNGWLKVEIICKFSDIAGAMIGSINYAHGPNGGNVQVGDTISFCTPQFEKGFCASSFIITGSTPATRAVDYVTIPARNNFSGMNISFLAEVSVNWDTFQLDNTYPMIVDNNQYFVRGKAFVAEFDATTATPYSYVVNEDGSTILSRGYAFEKQPSSHVFGFIFSGNGDVTSFVNGNKGGTSHGSTWKGTDSDSLVEVGGRLSDSTKLYGHIRNLRIWNRVLTDSQMREKV
Physico‐chemical
properties
protein length:723 AA
molecular weight: 77552,90640 Da
isoelectric point:4,91665
aromaticity:0,08022
hydropathy:-0,28050

Domains

Domains [InterPro]
IPR013609
ATT
1–134
IPR013609 DC_0141
DC_0602
STR
1–193
DC_0602 Coil IPR013320
IPR008969
ATT
5–73
IPR008969 G3DSA:2.60.120.200
PF13385
LEC
563–718
PF13385
AZF88929.1
1 723
Architecture
ATT
STR
ATT 1-134 | STR 135-723
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF88929.1
1 723
Domain Start End Length (AA) Confidence
N-terminal 1 532 532 0,5255
Central domain 533 712 181 0,4576
C-terminal 713 723 10 0,9853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-532
Central
533-712
C-terminal
713-723

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage BRET
[NCBI] 		2488948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF88929.1 [NCBI]
Genbank nucleotide accession
MK165087 [NCBI]
CDS location
range 19840 -> 22011
strand +
CDS
ATGTCGATTCGTTTAACTGGTATTTTAGTTGACGGGTTGAATAATCCGTTAGTTAATACTACTGTCACACTAATTGCAAGAAGTAACACGTTACTAGTGTTAGGTAGTAGCGAAGCTGTATTTCGCACAGACGCACAAGGTGCATATAATATCACAGTGAACCCAGGGCACTATGTGGTCATAGTAGGCCCTCAAGGAAAAGAACCATATAAAGCAGGTGAAATTGTTCTTTATGCAGATAGCCCAGAGGGATCTCTCAATGGATATCTGGTCAATTGGGTGGAAGAAGAACTAACACCAGATGTTATCAAACAAGTTCAACAACTTGTGGCTAACTCTGAGGAATACGCGTTACAAGCTGGTCGCTCTGCTGCGGCAGCAAATGCAGATGCTACGGATGCTCGCAATAGTAAGGCTTCAGCTGCTCAATCTGCTTCGGATGCACTTGTCTATAAAAATGATGCTAAAGCTAGTGAAGACGCTGCTAGACAAGCACAGGCTGGAGCTGCCGGTTCTGCTAACACTGCATCACAAGCTGTAACCACAATTCAAGGTCTAAAATCTGAGGTTGAGCAGTTAAAAGTAGACACACAGACTATTAAAGATAGTGCAGTAAGCGAGACGCAAGCAATTAAGAATAGTGCAGTAACCGAAACACAAGCAATTAAAGACGCTGCTGTGTCCGAAACTACCGCGCTAAAAGATGCTGCCGCTGCTTCAGCTACACAAGCAAGCAATAGCGCCACTGAAGCTGGACAACAAGCAAGCAACGCGGGTACAAGCGCAACCGCAGCTAAAAACGACGCGGACCGTGCAAAGGTAGAAGCAGACCGTGCGGAAGTTGCAGCTAACAGGGCTCCGGATCTTCAACCATTCCCTGATGTATGGATTCCATTTAATGACTCGCTGGATATGCTTGCAGGTTACTCGCCAGGCTATAAGAAAATAACAGTTGGTGAAGATGTTATTACAATGCCTTCTGATAAGGTTGTTAATTTCTCGCGTGCGTCAAATGCAACATATATAAACAAACACGGTGAGTTTTGTATTGCTAATATCGATGAACCTAGATTTGAAAAGCAAGGACTCTTAATCGAAGGGCAGAGGACAAACCACATTACTTTTAGTAACGACCCGGCTTCCTTAAACACGGATAGACATCGTAGCGATGTTACATATGGTGTTGATAAGTATGGTTTTACATACATAACGGCAACTGTAAACCAAAATGGTCAAGGTGATACGCCATCACTATTTTATTGCGAATACAATAATAGCATATATTGTCAGCAGAACGAATACGCAACCTTATCTATTAGAGTGAAAGCAAATAATATTTCCATAATTCCTCAATTTTATGCGTTGGGAGAAGATAATGCCCTTATTCTTGTTGCAAGATCTATATTGTCGTGTGATACAGGGGAGGTTACATCTACACTCGAAGCTAGAGGAACTGTAACACACAGAATCACCAAAGAAGATAACGGATGGCTGAAGGTTGAGATAATATGTAAATTTTCTGATATTGCAGGTGCTATGATTGGGAGCATCAACTATGCCCACGGCCCTAACGGAGGTAATGTGCAAGTTGGGGATACAATATCCTTTTGTACCCCGCAGTTTGAAAAGGGTTTTTGTGCATCCTCCTTCATTATTACGGGGAGCACACCTGCAACAAGGGCTGTGGATTATGTTACTATACCTGCGAGAAATAATTTCTCAGGGATGAATATTTCATTCCTTGCTGAGGTGAGCGTTAACTGGGATACCTTTCAATTAGATAATACATACCCAATGATAGTTGATAACAACCAGTACTTCGTAAGAGGAAAAGCATTTGTTGCGGAATTTGACGCAACCACCGCTACACCTTACTCGTATGTAGTAAATGAAGATGGATCAACTATATTATCAAGAGGTTATGCATTTGAAAAACAACCTTCTTCACATGTGTTTGGTTTTATTTTTAGTGGTAATGGAGACGTCACCTCATTTGTTAATGGGAATAAGGGGGGTACTTCACATGGTTCTACATGGAAAGGAACAGACTCGGACTCCCTAGTAGAAGTAGGTGGAAGACTTTCAGATTCAACTAAATTGTACGGTCATATTCGTAACCTTAGAATATGGAATCGAGTATTAACGGATAGTCAAATGAGGGAGAAAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f063c9204357cfc79e8423bdaf35c12eff93919078f677675f9b249b5f26c312
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7433
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Phage BRET from Intestine of Chicken in Abidjan Ngazoa-Kakou,S., Addablah,A.A., Soro,B.K., Tremblay,D., Rousseau,G., Loignon,S., Shao,Y., Lemire,N. and Moineau,S. 2019-01-31 — GenBank