Protein

View in Explore
Genbank accession
YP_010059476.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAVQRRALTFNFQRAVTMGEYTNSSVLEVAVAPLSSPSSSGLDATLVGPAQVQEVVLSDTVSVVFQLVPTDDPSLTERVTYRAAWRDKYMGRQHVQDFVMPDFDVDFDDLQNLGQIIGGETYVQWSDRMRPGGIAALNELGQVVDYEGNVVNGAAEAAIVQGNLNAEIVARQQGDASAISSSNAYTLQQIGQVYSTTAAQISSAVSLLQNADLTEKSARQAAVNQLNASLVAMQSTLSNQISALQNSLGTTNNALTGKADLVGGKIPTSQLPDISIGRAVAVAGETEMLGLTSAQVQQGDFAVRPDGVWFLNGSNPALIGNWVKFNAAGSVTSVNGQTGAVVLDSADVGARPAGEPVPQSAVDGLIAALAAKANSSTTTALSSRVGAIESDTTLVRTVNGQIVRAVSGDYLVYLDSQQRLTTKDGSLINVGGGGGVIAIPDIVGLQDALDDKLDAGDQTNPLPHSTTHGAGGSDPISISQNQVSGLAAILSNNQLSPTSAHEARIAALETSGGGGGGGEIAKANWFNGLATYLAADPADLQEIHGVTLRGPFSENETTGQVGYNPDGVAPAGHAYRYAYITPNGHLELREWNESNPPDDDFVPQSALDATNAQVATKASQVDLNALTATVGTKASTTALNSLATAVGGKVEQSEFADLQIVVGTKAGQPQVDALQTSVNGKASEASVTALAATVGTKANLVSGTVPLAEIPTLPQSKITNLESVLAAKADLSGGTVPLGQIPNLTVAKVTGLQSALDGKASLVDGKVPTSQIPNLALNTVVPVANRAAMLALTSEQVQPGDVAVIAEGPDVGSYMLSGVNPSVFGNWVKLASPSDVAVISVNGQNGVVVLGAADVGARPAGGAIAISEITNLQNTLNAKADNSAMTTALAGKTSPADVQNTLTQSQQNKLLANLVSTSAIATLSGQQSIDGVLAPLNSRVLLTAQTSSAANGLYIVNSGAWTRVADMAVGSYFVRGTVVMVSGGTNNANTFWQITSDSGVVGTNANSWSKVMTAGAPIVYTGSLGVQKVGTDFRAQVVSGGGVSATASGLQLDTNVAVRKYSGDVPAGSTVATITHGLGTTDVMAMFNDKAAGDAVLLGWRPTGPNTISAEFSTAPAAGQYRVKVFG
Physico‐chemical
properties
protein length:1127 AA
molecular weight: 115079,97780 Da
isoelectric point:4,63394
aromaticity:0,04525
hydropathy:0,03904

Domains

Domains [InterPro]
DC_1073
STR
94–597
DC_1073 DC_1656 DC_1609
DC_1656
STR
743–822
DC_1656
YP_010059476.1
1 1127
Architecture
STR
STR
STR
STR 94-597 | STR 712-822 | STR 902-1127
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Skog
[NCBI] 		2704033 Uroviricota > Caudoviricetes > Skogvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010059476.1 [NCBI]
Genbank nucleotide accession
NC_054725 [NCBI]
CDS location
range 147699 -> 151082
strand +
CDS
GTGGCTGTTCAGCGCAGGGCGCTCACGTTCAACTTCCAGCGTGCGGTGACCATGGGGGAGTACACCAACTCCTCTGTGCTCGAAGTGGCCGTTGCTCCCCTGTCTTCGCCCAGCTCCTCGGGCCTGGACGCCACTCTCGTCGGACCGGCTCAGGTCCAGGAGGTGGTGCTCAGCGACACCGTCAGCGTCGTCTTCCAGCTGGTCCCCACCGATGACCCCTCTCTCACCGAGCGGGTCACCTATCGGGCCGCCTGGCGTGACAAGTACATGGGACGTCAGCACGTCCAGGACTTCGTCATGCCGGACTTCGACGTCGACTTCGATGACCTGCAGAACCTCGGCCAGATCATCGGCGGCGAGACCTACGTTCAGTGGTCGGACCGCATGCGCCCCGGCGGCATCGCCGCACTCAACGAGCTGGGGCAGGTCGTCGACTACGAGGGCAACGTGGTCAACGGTGCGGCCGAGGCCGCGATCGTCCAGGGCAACCTCAACGCCGAGATCGTCGCCCGCCAGCAGGGCGACGCGTCAGCGATCAGCTCGTCCAACGCTTACACCCTCCAGCAGATCGGCCAGGTCTACTCCACCACGGCCGCCCAGATCAGCTCGGCGGTCTCGCTGCTGCAGAATGCCGACCTGACCGAGAAGAGCGCCCGGCAGGCGGCGGTCAACCAGCTCAACGCCAGCCTGGTCGCCATGCAGTCGACGCTGTCCAACCAGATCTCGGCGCTGCAGAACAGTCTCGGCACCACCAACAACGCGCTCACCGGCAAGGCCGACCTGGTCGGGGGCAAGATCCCCACGAGCCAGCTGCCCGACATCAGTATCGGCCGGGCGGTCGCTGTCGCCGGTGAGACCGAGATGCTTGGGCTCACCTCGGCCCAGGTGCAGCAGGGTGACTTCGCCGTCCGTCCCGACGGCGTGTGGTTCCTCAACGGGTCCAACCCCGCGCTCATCGGCAACTGGGTCAAGTTCAACGCCGCAGGCTCGGTGACCAGCGTCAACGGTCAGACTGGCGCGGTCGTGCTCGACTCTGCCGACGTCGGTGCTCGCCCGGCCGGAGAACCGGTGCCGCAGTCTGCCGTGGACGGGCTTATCGCTGCCCTGGCCGCCAAGGCCAACTCCTCGACCACCACTGCGCTGTCCTCCCGCGTGGGGGCCATCGAGTCCGACACCACCCTGGTGCGCACCGTCAATGGACAGATCGTGCGGGCGGTCTCCGGTGATTACCTGGTGTACCTCGACAGCCAGCAGCGGCTGACCACCAAGGACGGCTCGCTGATCAACGTCGGCGGCGGTGGTGGCGTCATCGCCATTCCCGACATCGTCGGCCTGCAGGACGCCCTGGACGACAAGCTCGACGCCGGGGACCAGACCAACCCGCTGCCGCACTCGACCACCCATGGCGCGGGCGGCTCCGACCCCATCTCCATCAGTCAGAACCAGGTCTCCGGCCTGGCCGCGATCCTGAGCAACAACCAGCTCTCGCCCACCAGCGCGCACGAGGCGCGCATCGCCGCGCTGGAAACCTCCGGCGGCGGAGGCGGTGGTGGCGAGATCGCCAAGGCCAACTGGTTCAATGGGCTCGCCACCTACCTGGCGGCCGATCCTGCCGACCTGCAGGAGATCCACGGCGTCACGCTGCGCGGTCCCTTCTCGGAGAACGAGACCACCGGCCAGGTCGGCTACAACCCTGACGGCGTCGCCCCGGCCGGTCACGCCTACCGCTACGCCTACATCACCCCCAACGGCCACCTGGAGCTGCGGGAGTGGAACGAGAGCAACCCGCCGGACGACGACTTCGTTCCCCAGAGTGCGCTGGACGCCACCAACGCCCAGGTGGCCACCAAGGCCAGCCAGGTCGACCTCAACGCCCTCACCGCGACGGTGGGCACCAAGGCGAGCACCACCGCGCTCAACTCGCTCGCGACGGCCGTCGGCGGCAAGGTCGAGCAGAGCGAGTTCGCTGACCTGCAGATCGTGGTCGGCACCAAGGCGGGCCAGCCCCAGGTCGATGCTTTGCAGACGTCGGTCAACGGCAAGGCCAGTGAGGCCTCGGTCACCGCGCTCGCCGCGACGGTGGGCACCAAGGCCAACCTCGTCTCCGGCACCGTCCCGCTGGCGGAGATCCCCACCCTGCCGCAGTCGAAGATCACCAACCTCGAATCGGTGCTCGCCGCCAAGGCCGACCTGTCCGGTGGCACGGTCCCGCTCGGCCAGATCCCCAACCTGACCGTCGCCAAGGTCACCGGCCTGCAGAGCGCTCTCGACGGCAAGGCCAGCCTCGTCGACGGCAAGGTGCCGACCAGCCAGATCCCCAACCTCGCGCTCAACACCGTCGTCCCGGTGGCCAACCGGGCGGCCATGCTCGCGCTCACTTCCGAGCAGGTCCAGCCGGGCGACGTCGCTGTCATTGCCGAGGGTCCCGACGTGGGCAGCTACATGCTCTCCGGGGTCAACCCCTCGGTCTTCGGCAACTGGGTCAAGCTCGCCTCCCCGTCGGATGTCGCGGTCATCAGCGTCAACGGCCAGAACGGTGTGGTGGTGCTCGGTGCCGCCGACGTCGGCGCGCGTCCGGCCGGTGGGGCCATCGCGATCAGCGAGATCACCAACCTGCAGAACACCCTCAACGCCAAGGCCGACAACTCGGCGATGACCACCGCGCTGGCGGGCAAGACCTCCCCGGCCGACGTGCAGAACACCCTGACCCAGTCCCAGCAGAACAAGCTGCTGGCCAACCTGGTCTCCACCTCGGCCATCGCCACCCTGTCGGGCCAGCAGTCCATCGATGGGGTGCTCGCCCCGCTGAACTCGCGCGTGCTGCTGACCGCCCAGACCTCCTCGGCGGCCAACGGGCTCTACATCGTCAACAGCGGCGCGTGGACGCGCGTCGCCGACATGGCCGTAGGCAGCTACTTCGTCCGAGGCACCGTGGTGATGGTCTCCGGCGGCACGAACAACGCCAACACCTTCTGGCAGATCACCTCCGACTCCGGCGTGGTCGGCACCAACGCCAACAGCTGGTCCAAGGTGATGACCGCCGGAGCCCCGATCGTGTACACCGGCAGCCTCGGCGTGCAGAAGGTCGGCACCGACTTCCGCGCCCAGGTGGTCTCCGGCGGTGGCGTCTCGGCGACCGCCAGCGGCCTGCAGCTCGACACCAACGTCGCGGTGCGCAAGTACAGCGGCGATGTCCCGGCGGGCAGCACGGTCGCCACCATCACCCACGGCCTGGGGACCACCGACGTCATGGCCATGTTTAACGACAAGGCCGCAGGCGACGCGGTGCTGCTGGGCTGGCGGCCGACCGGGCCCAACACCATCTCGGCCGAGTTCTCCACCGCCCCGGCCGCCGGGCAGTACCGCGTCAAGGTCTTCGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5fd7faff718ceebe5005a8dc3be6cdc109031e9b1739c1d12170e106c6e42eeb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50