Protein

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Genbank accession
XAN63704.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTELKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNINNIELKIDPTIIFATLKDIQDLDAKISNVNTKIDTTKTELTSNIETAKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQTITIDDWIDNQEGGFKATVTHGLLTQRITVSIIDATTKDNVVPDFTIIDDNSIEVRSGVKVELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIHEEIGKVAEQLTGINSNIISTVNNDILPI
Physico‐chemical
properties
protein length:341 AA
molecular weight: 37206,40970 Da
isoelectric point:4,57505
aromaticity:0,04692
hydropathy:-0,20147

Domains

Domains [InterPro]
IPR051934
Unmapped
4–214
IPR051934
IPR022225
ATT
5–151
IPR022225 Coil
DC_0386
STR
5–339
DC_0386
XAN63704.1
1 341
Architecture
ATT
STR
ATT 5-151 | STR 152-339 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage phiCDKH02
[NCBI] 		3145026 Viruses >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN63704.1 [NCBI]
Genbank nucleotide accession
PP767789.1 [NCBI]
CDS location
range 46362 -> 47387
strand +
CDS
TTGGCTATAGATAAAAGTTATTACACTATAATTACAGATGTAGGAAAAGCAAAGATAGCAAATGCAAGTGTCACAGGTAATAAAGTAGGGTTTGTAAAAATTCAACTTGGTGATGGTGGAGGAAGTGAGTATACTCCTACTGAAAGTCAGACAGAACTTAAAAATGTGGTATGGGAAGGCAACATCGGAAATACAACCACAGATGAAACTGCGCCAAACTGCATAATATTAGAGAGTTTAATACCATCAAGTGTAGGTGGATTTATGATAAGAGAAATAGGATATTTAGATGATGAAAATAATCTAATTGCAATCTCTAAATATAAAGAATGTTATAAACCTTCTATAGAACAAGGAGCAGTTGTTGATATGAAGGTTAAAACTGTGCTTATTGTATCTAATATAAATAATATAGAACTTAAAATTGACCCTACAATAATTTTTGCTACGCTCAAAGATATACAGGATTTAGATGCTAAAATAAGCAATGTAAACACTAAAATTGATACAACTAAAACAGAGTTAACAAGCAACATAGAAACTGCTAAGACAGAGTTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATTAAAATTGACCAGCTAATAGCAGGTGGTTCAAATGTTGCATCTACTCAAACAATAACAATTGATGATTGGATAGATAATCAAGAAGGTGGATTCAAAGCAACTGTAACACATGGTTTATTAACACAGAGAATAACTGTAAGTATTATAGATGCTACTACAAAAGATAATGTAGTACCCGATTTCACAATTATAGACGATAATTCTATTGAGGTTAGAAGTGGAGTAAAAGTTGAGTTAAATGTTTATGTGATTAATGGGAATGCAGAGACTCATTTTATTAATGCGACTGTAGATGATAATAGAGTGTCTGAAATGACTACTTATTCATCAAAAAAGATACATGAAGAAATTGGTAAGGTAGCAGAGCAACTGACAGGAATTAATAGTAATATTATATCGACTGTAAATAACGACATACTACCTATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
29729a0c71aaf0430e9d633f26f561f602cf616e3a93ca15a700c413cd26f3ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8638
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the phiCDKH02 bacteriophage commonly found in clinical isolates of Clostridioides dificile Iwanicki,A., Wultanska,D., Pituch,H. and Hinc,K. 2021-02-22 — GenBank