Protein

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Genbank accession
YP_009790819.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPLYSQSIKNLKSGISQQPEILKYPEQGNQQINGWSSEIAGLQKRPPIIFNRMLGRKGLYGDAPFIHLINRDEHERYYAIFTGSEIKVIGLDGTPYVVKGNFSYVQTNNPRKDLRMVTVADYTFVVNTSKVIKEDTSKNLPDFNEKQDALINVRGGQYGRTLIVGFNGAEQAKYLIPNGDRPEHVKNTDSQFIAEELAKQMREKLPTWTFTVGQGYIHIQAPRGINIENLYTKDGYADQLLNPVTHYVQTFNKLPLVAPDGYMVKIVGDTSKTADSYYVKYSAAKKVWAETLGWDTPKGFLDNTMPHTLVRESDGTFSFKVHEWKQRRCGDEDTNPLPSFVDSSITDIFFYRNRLGFLSGENVILSRTSRYFDFFPASVANNSDDDPIDVAISHNRISNLKFAVPFSEELLLWSDEAQFTLRSSSILSARTIELNLVTEFDVSDQARPFGIGRGIYFANPRSTFTSISRYYAVQDVSSVRNAEDMTAHVPNYIPNGVFSIHGSNTENFCTVLTKGAPSKIFIYKYLYTDEQLLQQSWSHWDLGEECTILACTTIGSKMTIIFENQHNVFVGTVRFTRDIKDFPQEPYRSHLDLKTLYTIPTDKYNITTNITRIRLADIYNSARFTRGKVTLMGVDGRNFEFQPKEGFWASDDTLDLQGDYSGKQFVVGFNIPFTYEFAKFLIKKADKDGSMTTEDIGRLQLRRAWVNYEESGAFSVRVVHGSTSFNYEMSGSRLGSRELRIGELNISTDQFRFPVTGNALHTQVFLLSDSPTPLNIIGCGWEGSYIRRSRSL
Physico‐chemical
properties
protein length:792 AA
molecular weight: 89984,25440 Da
isoelectric point:6,59909
aromaticity:0,11995
hydropathy:-0,40669

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
YP_009790819.1
1 792
Architecture
TTP
TTP 1-791 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790819.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9898
Central domain 145 343 200 0,1167
C-terminal 344 792 448 0,2444
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage PHB01
[NCBI] 		2006930 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Wuhanvirus
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790819.1 [NCBI]
Genbank nucleotide accession
NC_047832.1 [NCBI]
CDS location
range 20915 -> 23293
strand +
CDS
ATGCCACTATATAGCCAAAGTATTAAGAATTTAAAAAGTGGTATCAGCCAACAGCCAGAGATTTTAAAATATCCAGAACAAGGTAACCAACAAATTAATGGGTGGTCTAGTGAAATCGCAGGGTTACAAAAGAGACCTCCTATTATCTTCAATCGTATGCTTGGTCGTAAAGGTCTCTATGGGGACGCTCCGTTCATTCATTTAATTAATCGTGATGAACATGAGAGATACTACGCTATCTTCACTGGGTCTGAAATCAAGGTGATTGGTCTTGATGGGACACCTTATGTAGTCAAAGGAAATTTCTCTTATGTGCAAACAAATAACCCACGCAAAGACCTCCGAATGGTTACAGTCGCTGATTATACTTTCGTAGTTAATACTTCTAAGGTAATCAAAGAGGACACCTCAAAAAATCTACCAGACTTCAATGAGAAGCAAGATGCTTTGATAAATGTTCGAGGCGGGCAATATGGGAGAACTCTCATTGTAGGTTTTAACGGTGCAGAACAAGCAAAATACTTGATTCCAAATGGGGATAGACCAGAACACGTTAAGAACACTGACTCTCAGTTTATCGCTGAAGAATTAGCTAAACAAATGAGAGAGAAACTACCAACATGGACGTTTACTGTTGGTCAGGGTTATATCCACATTCAAGCACCACGAGGAATAAATATTGAGAATCTTTATACGAAAGACGGGTATGCAGACCAATTGTTAAACCCTGTGACCCATTATGTCCAGACGTTTAATAAGTTACCGTTAGTGGCACCAGATGGTTACATGGTGAAGATTGTTGGGGACACATCAAAGACAGCTGATAGTTATTACGTTAAGTATAGCGCAGCCAAGAAGGTGTGGGCAGAGACTTTAGGTTGGGATACACCTAAAGGGTTCCTTGATAATACAATGCCTCATACTTTAGTTCGTGAGTCAGACGGTACATTCTCATTTAAAGTCCATGAGTGGAAACAGAGACGGTGTGGCGATGAAGACACAAACCCACTACCGTCTTTCGTAGATAGTTCTATTACAGATATCTTCTTCTACCGTAACCGACTAGGTTTTCTTAGTGGTGAGAACGTAATCCTAAGTAGGACATCACGTTACTTCGACTTCTTCCCAGCTAGTGTAGCAAATAATTCAGATGATGACCCTATTGATGTAGCAATTAGTCATAATAGGATTAGCAACCTTAAATTTGCGGTTCCATTTAGCGAGGAATTATTATTGTGGTCTGATGAAGCTCAGTTTACACTAAGGTCTTCAAGTATACTCTCAGCTCGAACCATTGAGTTAAACTTAGTGACCGAGTTTGATGTGAGCGACCAAGCAAGACCGTTTGGTATTGGTCGTGGTATTTACTTTGCGAACCCACGAAGCACCTTTACGTCTATCAGTCGGTATTATGCGGTACAAGACGTATCGAGTGTGCGTAATGCTGAGGATATGACAGCCCATGTCCCTAACTATATCCCAAATGGGGTCTTTAGTATTCATGGGTCTAACACAGAGAACTTCTGTACGGTGCTTACTAAGGGTGCTCCAAGTAAGATTTTCATATACAAATACTTATATACGGATGAGCAATTACTCCAACAGTCTTGGTCACATTGGGATTTAGGTGAGGAGTGTACTATCTTGGCTTGTACAACTATTGGTAGTAAGATGACGATTATATTTGAGAATCAACATAATGTGTTCGTAGGGACAGTAAGATTCACAAGAGACATCAAGGACTTCCCACAGGAACCTTATCGGTCTCACCTTGATTTGAAGACCCTTTACACAATTCCAACCGATAAATATAATATCACAACGAACATCACACGGATTCGTCTAGCTGATATTTATAACAGTGCAAGATTCACAAGAGGTAAAGTCACCTTAATGGGTGTTGATGGTCGAAACTTTGAGTTCCAACCGAAAGAGGGCTTCTGGGCATCTGACGACACTTTGGATTTACAAGGGGATTACTCTGGGAAACAGTTCGTAGTTGGGTTCAACATTCCGTTTACTTACGAGTTTGCTAAGTTTCTCATTAAGAAAGCAGATAAAGATGGCTCAATGACCACTGAGGATATCGGCAGGTTACAGTTGCGTCGAGCATGGGTGAACTACGAAGAATCTGGAGCGTTCAGTGTGAGAGTTGTACATGGTTCCACAAGTTTTAACTATGAGATGTCCGGCTCCAGATTGGGGTCTAGAGAACTTCGTATTGGCGAACTAAACATTAGTACTGACCAATTCAGGTTCCCTGTAACAGGCAACGCTTTACACACGCAGGTGTTTCTACTTAGTGACTCACCAACACCACTAAACATTATTGGCTGTGGTTGGGAGGGTAGCTACATTCGTAGAAGTCGCTCGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc958812e39dc4fef939e4ea481e1f43c8de079a3c86eb3fa485dbddfbe9cde6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9090
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of novel T7-like phage PHB01 against Capsular type D Pasteurella multocida Chen,Y., Sun,E., Yang,L., Song,J. and Wu,B. 2018-01-06 — GenBank