Protein

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Genbank accession
YP_010668864.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MANNSIKGLPVYPWNPFNDMTINEIKGEIVNVQPTPGGSIIIPRCAPFFARGLKVIHRASGRELELKKGEFSLLYPFGSFISRYSQLVYSGILINGVTEPTNFELEYSTIGGDFVLDDVAYAQAVANTLTSPRRADWSELVNLPPAWPADPHDHPASDTFNYSDMIIALQSYIDAMTGGGNPESIKSLLDDHLKADLQDAHKATLGDLGIKNLQDWAMAKQEDIGGNSEELLVNINVLKAAIRQHAAGQWQ
Physico‐chemical
properties
protein length:251 AA
molecular weight: 27551,77600 Da
isoelectric point:4,90744
aromaticity:0,08765
hydropathy:-0,21116

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage D6
[NCBI] 		2593322 Uroviricota > Caudoviricetes > Chimalliviridae > Ludhianavirus D6 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010668864.1 [NCBI]
Genbank nucleotide accession
NC_070958 [NCBI]
CDS location
range 111651 -> 112406
strand +
CDS
ATGGCAAACAATTCAATTAAGGGGCTTCCGGTCTACCCCTGGAACCCTTTCAACGACATGACGATTAACGAGATCAAAGGTGAAATCGTTAACGTGCAACCGACTCCTGGTGGGTCTATCATCATTCCACGCTGCGCTCCCTTCTTTGCGAGAGGGCTCAAAGTCATACACCGCGCATCGGGACGGGAATTGGAATTGAAGAAGGGTGAATTCTCACTTCTTTATCCGTTCGGCTCTTTCATTTCCAGGTACAGCCAACTGGTGTATAGTGGGATACTGATCAACGGTGTCACAGAACCCACTAACTTTGAGCTTGAGTACAGCACCATAGGCGGTGATTTCGTACTGGATGACGTTGCTTACGCTCAGGCCGTGGCCAACACACTCACCAGCCCACGACGCGCTGATTGGAGCGAACTTGTTAACCTTCCGCCCGCCTGGCCGGCAGATCCCCACGATCATCCCGCATCGGATACCTTTAACTACTCCGATATGATCATCGCCCTCCAAAGTTACATCGACGCCATGACTGGCGGCGGTAACCCGGAGTCTATCAAGTCCTTACTGGACGATCACTTGAAGGCTGACCTCCAGGACGCTCACAAAGCCACACTGGGTGATCTCGGGATTAAGAATCTCCAAGACTGGGCCATGGCAAAACAAGAAGATATTGGTGGTAATTCAGAAGAGTTGCTCGTTAATATCAACGTGCTGAAGGCTGCGATCAGGCAACATGCCGCAGGGCAATGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b65ceea1a86a9174ec8a63aefa6ab0a1e715979f9b44e7c7152d4c0f1a94c663
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7325
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage D6 Rai,S., Tyagi,A., Kumar,N. and Singh,N. 2020-06-10 — GenBank