Protein

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Genbank accession
ULA52042.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTVGSSQQCGVYPGNGDNATFAVTNIDIVSWNGIGFKSSQGSADRTVVINARNGDISTKGVVTAAGQVRSDATAPIAANDLTRKDYVDGRINIVTDNANSRVLRSGDTMAGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23294,41750 Da
isoelectric point:5,85649
aromaticity:0,09091
hydropathy:-0,30227

Domains

Domains [InterPro]
DC_0466
STR
1–218
DC_0466
IPR005601
STR
56–192
IPR005601
ULA52042.1
1 220
Architecture
STR
STR 1-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ULA52042.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9775
Central domain 33 209 178 0,1552
C-terminal 210 220 10 0,9391
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-RPN187
[NCBI] 		2917961 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ULA52042.1 [NCBI]
Genbank nucleotide accession
OL770074.2 [NCBI]
CDS location
range 154474 -> 155136
strand +
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCTGTTATATGGCACCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCGCAAGCGGCTGATAACGACTTCGTTTCTAAAGCTAATGGTGGTACTTACGCTGCGACTGTTCGATTTAATGGAGGCGTACATGTTCCTACTGTAGGTAGTAGTCAACAGTGTGGTGTTTATCCAGGTAACGGTGATAATGCTACTTTTGCTGTAACAAATATCGATATTGTTTCGTGGAATGGTATTGGTTTTAAGTCATCACAAGGTTCAGCAGACCGAACTGTTGTAATTAATGCACGTAACGGTGATATTAGTACAAAAGGCGTTGTGACAGCAGCTGGTCAAGTAAGAAGTGATGCGACTGCTCCTATAGCAGCGAATGACCTTACTAGAAAAGATTATGTTGATGGACGAATAAATATTGTTACAGATAACGCAAATTCCCGTGTATTGCGTTCTGGCGATACTATGGCTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCATCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87bd85c35425e26c575485ed5b15fa048c4f4f3a5f15ea43cf5e8e0572023882
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Escherichia phage vB_EcoM-RPN187 Imklin,N., Sriprasong,P., Thanantong,N. and Nasanit,R. 2022-08-01 — GenBank