Protein

View in Explore
Genbank accession
AUR93013.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFKYNGLPDTPDDSQLFKAYKASLGNGANLLSNHNFLVQTPDDSQPAPSATPTSYPPGYQIFSGVFANETSGITNLTYIDGRVSFSGGDLYFAVPNTGGVERLTSDQLTASVADFDGKPRTRGVSFALVGDEYRVTVGVDALEDVSAALTPLGSVKFEQGSVATGHEVGSPVFRKISFSELPGGTDDDKVSFLINSKYNNVIIDRNVYLNADSTIPRDKNLYFVDSFKVNVSNGVTVNINSLVFSDHYPVGGEGSCLLNDYVIQVKPSGGDTSDPQDLNSMVPDIYWQNVKGQIHHGTYDVHVHIDNKWSGGALIGVPGQRATLTIYGVDDDSGTITPTTAQNVKIKSAMLTSCGGGAFNPVIGYMELTDINTYTDEKTQIEFYGCPSGADIGLRFRPTGGIEASGVFSYGSNISSENEDFGVNLLQWAYLTKHGGVISANGNTALNQGLSPKGKLILGIGTAVSGSIHISDSSGLTTDAYSRWNTSGAGNGFVYDQGEQSCYGIELLANSISAYHSYFTSLTDVQDASFSGGSVSLDEIGDGYKGLKVTSGSTSGAGTAQIRRVNTISRQSINARQSLKAAILIETLQADTAFEVGIGAKAVGQPFVYIEVTNTGVFGVYRDTSGVESKTQLADSSFIPNRMLTYEIDIIPNRTEVGSHTAVAIFRLSDENDITRKVVSLDIDQDSSNNIIWSATSRTSGANTMEAFLSELRVYRQS
Physico‐chemical
properties
protein length:775 AA
molecular weight: 82775,32860 Da
isoelectric point:4,68805
aromaticity:0,08903
hydropathy:-0,26374

Domains

Domains [InterPro]
DC_0512
STR
1–258
DC_0512 DC_2185
AUR93013.1
1 775
Architecture
STR
RBD
STR 1-258 | RBD 503-774 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93013.1
1 775
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,6705
Central domain 244 537 295 0,9410
C-terminal 538 775 237 0,9501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-537
C-terminal
538-775

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.181.O._10N.286.46.C9
[NCBI] 		1881433 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93013.1 [NCBI]
Genbank nucleotide accession
MG592547 [NCBI]
CDS location
range 32086 -> 34413
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGACAACAATCCATCAACAACGAATAACGGCTCTCCGTTAAAAGCCATTGACCGTAACGAGTTACTTGCTCGCGACGAAGCGATCATGAATGACGCTGGCTTTAAGTACAACGGCCTACCTGACACGCCTGACGATTCCCAACTATTCAAGGCTTACAAAGCCTCGCTTGGTAATGGCGCTAACCTGCTATCAAACCACAATTTTCTAGTTCAGACGCCTGATGATTCGCAGCCTGCTCCTAGCGCAACGCCAACAAGTTACCCGCCTGGTTATCAAATATTCTCTGGCGTTTTTGCCAATGAAACATCAGGGATCACAAACCTAACTTACATTGATGGTCGAGTGTCGTTCAGTGGTGGTGATTTGTATTTTGCTGTGCCGAATACTGGTGGTGTTGAGCGTTTAACTTCAGATCAACTAACTGCATCTGTCGCTGACTTTGACGGCAAACCACGCACTCGTGGTGTGTCATTCGCTTTGGTTGGTGATGAGTATCGCGTGACGGTTGGCGTTGATGCGCTTGAAGATGTGAGTGCTGCATTGACTCCGCTTGGATCGGTTAAGTTTGAGCAGGGGAGTGTGGCGACAGGGCATGAGGTTGGCTCTCCAGTTTTTAGAAAAATATCATTTTCAGAACTTCCTGGTGGAACTGATGACGATAAGGTTTCATTCTTGATAAACTCAAAATACAACAATGTAATCATAGATCGCAATGTGTATTTGAATGCCGACTCAACAATTCCTAGAGATAAAAATTTATATTTTGTTGATTCATTCAAGGTAAATGTGTCGAATGGCGTAACTGTAAATATAAATTCATTAGTTTTCTCCGATCATTATCCGGTTGGTGGTGAAGGGTCTTGTCTTTTAAACGACTACGTAATACAAGTAAAGCCTTCAGGGGGTGACACTTCAGACCCTCAAGATCTCAATTCAATGGTTCCTGATATTTATTGGCAGAATGTAAAGGGGCAAATTCACCATGGGACGTATGACGTACATGTGCACATTGACAATAAATGGTCAGGCGGTGCTTTAATTGGAGTGCCGGGACAGCGTGCCACCTTGACCATCTATGGCGTAGATGACGACTCTGGAACAATTACCCCAACAACCGCTCAAAACGTAAAGATAAAATCAGCAATGCTTACTAGCTGCGGAGGAGGTGCTTTTAATCCGGTGATTGGTTATATGGAATTAACCGATATAAACACATACACCGACGAGAAAACACAAATAGAATTCTACGGGTGCCCTAGCGGTGCTGATATTGGCCTAAGGTTTAGGCCTACTGGAGGGATCGAGGCTTCAGGTGTTTTCAGTTACGGGTCTAATATATCATCAGAAAATGAAGATTTCGGCGTAAATCTCCTTCAGTGGGCCTACTTAACTAAACACGGAGGCGTTATATCTGCTAACGGAAACACCGCCCTCAACCAAGGTTTAAGCCCTAAAGGGAAGCTTATTTTGGGCATCGGCACCGCCGTATCTGGATCAATACACATCTCAGACTCTAGTGGCTTAACCACTGACGCATATTCACGTTGGAATACATCAGGCGCAGGTAATGGATTTGTTTATGATCAAGGCGAACAATCTTGCTATGGAATTGAACTTCTAGCTAACTCTATAAGCGCATACCACAGTTATTTTACATCACTAACAGATGTTCAAGACGCGTCGTTTTCTGGCGGTTCGGTTTCTTTGGATGAAATAGGCGACGGATATAAAGGATTAAAGGTAACTTCGGGTTCTACATCCGGTGCCGGAACAGCCCAGATAAGAAGGGTAAATACTATTTCAAGGCAGTCTATTAACGCAAGGCAATCATTAAAAGCTGCGATTTTAATTGAAACGCTACAAGCTGATACAGCTTTTGAGGTTGGAATTGGCGCAAAAGCTGTAGGTCAGCCATTCGTATATATAGAGGTAACAAATACCGGAGTGTTCGGGGTTTATCGTGACACATCAGGTGTTGAGTCGAAAACGCAACTTGCCGATTCATCTTTTATACCCAACAGAATGTTGACGTATGAGATTGACATCATACCAAATCGAACTGAGGTCGGATCTCACACCGCTGTGGCGATATTCAGATTATCTGATGAGAACGACATCACAAGAAAGGTTGTAAGCCTTGATATAGATCAGGACTCATCAAATAATATAATATGGTCTGCAACTTCAAGAACCTCAGGTGCAAACACAATGGAAGCATTTCTATCTGAGTTAAGGGTTTACAGGCAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11acd42182f3b1cd55c5b4e905950efe22c65b33fcb45ff3ac9db899d6027608
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank